Variant report

Variant	rs17763629
Chromosome Location	chr5:57569470-57569471
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs10036626	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3489100	chr5:57545689-57669673	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv3489101	chr5:57545689-57669673	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv2762520	chr5:57557770-57578659	Enhancers Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57567000-57571600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr5:57568000-57570600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr5:57568200-57571800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr5:57568800-57570400	Enhancers	HUVEC	blood vessel
5	chr5:57568800-57570400	Enhancers	NHEK	skin
6	chr5:57569000-57569600	Enhancers	A549	lung
7	chr5:57569000-57569800	Enhancers	Fetal Stomach	stomach
8	chr5:57569000-57570000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr5:57569000-57570000	Enhancers	Adipose Nuclei	Adipose
10	chr5:57569000-57570000	Enhancers	Fetal Lung	lung
11	chr5:57569000-57570000	Enhancers	Skeletal Muscle Female	skeletal muscle
12	chr5:57569000-57570200	Enhancers	Muscle Satellite Cultured Cells	--
13	chr5:57569000-57570200	Enhancers	HMEC	breast
14	chr5:57569000-57570400	Enhancers	Pancreatic Islets	Pancreatic Islet
15	chr5:57569200-57570000	Enhancers	Primary hematopoietic stem cells	blood
16	chr5:57569200-57570200	Enhancers	Brain Anterior Caudate	brain
17	chr5:57569200-57570200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
18	chr5:57569400-57569600	Enhancers	HSMM	muscle
19	chr5:57569400-57570200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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