The 2.0 version of rSNPBase

Variant report

Variant rs17763827
Chromosome Location chr11:102164887-102164888
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:102159200-102165000 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr11:102159200-102165800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr11:102160400-102165800 Weak transcription Primary hematopoietic stem cells blood
4 chr11:102160600-102165000 Weak transcription NHEK skin
5 chr11:102160800-102165200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr11:102160800-102165200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr11:102161000-102165200 Weak transcription HSMM muscle
8 chr11:102161000-102171800 Weak transcription Aorta Aorta
9 chr11:102161600-102165000 Weak transcription Dnd41 blood
10 chr11:102162000-102171400 Weak transcription Fetal Thymus thymus
11 chr11:102163400-102165000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
12 chr11:102163400-102165000 Enhancers HepG2 liver
13 chr11:102164000-102165200 Enhancers Primary B cells from cord blood blood
14 chr11:102164200-102165000 Active TSS Primary T helper naive cells from peripheral blood blood
15 chr11:102164200-102165400 Enhancers Primary T cells from cord blood blood
16 chr11:102164200-102166200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
17 chr11:102164400-102165000 Active TSS Primary T helper cells PMA-I stimulated --
18 chr11:102164400-102165000 Active TSS Primary T helper 17 cells PMA-I stimulated --
19 chr11:102164400-102165000 Active TSS GM12878-XiMat blood
20 chr11:102164400-102165200 Weak transcription A549 lung
21 chr11:102164400-102166400 Enhancers Primary T helper naive cells fromperipheralblood blood
22 chr11:102164600-102165000 Enhancers Primary monocytes fromperipheralblood blood
23 chr11:102164600-102165000 Flanking Active TSS Primary B cells from peripheral blood blood
24 chr11:102164600-102165000 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
25 chr11:102164600-102165000 Active TSS Primary T helper cells fromperipheralblood blood
26 chr11:102164600-102165000 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr11:102164600-102165000 Enhancers Primary mononuclear cells fromperipheralblood Blood
28 chr11:102164600-102165000 Active TSS Duodenum Mucosa Duodenum
29 chr11:102164600-102165000 Active TSS Monocytes-CD14+_RO01746 blood
30 chr11:102164600-102165200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr11:102164600-102165200 Enhancers Muscle Satellite Cultured Cells --
32 chr11:102164600-102165200 Enhancers Brain Cingulate Gyrus brain
33 chr11:102164600-102165600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr11:102164600-102166200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr11:102164800-102165000 Active TSS Primary T cells fromperipheralblood blood
36 chr11:102164800-102165000 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
37 chr11:102164800-102165000 Enhancers Placenta Amnion Placenta Amnion
38 chr11:102164800-102165000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
39 chr11:102164800-102165200 Enhancers Stomach Smooth Muscle stomach
40 chr11:102164800-102165600 Enhancers Fetal Lung lung
41 chr11:102164800-102165600 Weak transcription K562 blood
42 chr11:102164800-102165800 Enhancers Primary T killer naive cells fromperipheralblood blood
43 chr11:102164800-102171400 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015