Variant report

Variant rs17779352
Chromosome Location chr7:17349626-17349627
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:17339800-17351400 Weak transcription Lung lung
2 chr7:17340400-17350600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr7:17341200-17369600 Weak transcription Ovary ovary
4 chr7:17341600-17358200 Weak transcription Fetal Intestine Small intestine
5 chr7:17341600-17379600 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr7:17343000-17351000 Weak transcription Fetal Intestine Large intestine
7 chr7:17343200-17351000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr7:17343400-17370600 Weak transcription Primary B cells from cord blood blood
9 chr7:17344200-17351600 Weak transcription Esophagus oesophagus
10 chr7:17345000-17351400 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr7:17345200-17349800 Enhancers A549 lung
12 chr7:17345200-17350000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
13 chr7:17345200-17351400 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr7:17345200-17351800 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr7:17345200-17379600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr7:17345600-17350600 Weak transcription Primary B cells from peripheral blood blood
17 chr7:17345600-17350600 Weak transcription Primary T cells fromperipheralblood blood
18 chr7:17345600-17350600 Weak transcription NH-A brain
19 chr7:17345600-17351600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr7:17345600-17378000 Weak transcription Fetal Thymus thymus
21 chr7:17345600-17378600 Weak transcription Spleen Spleen
22 chr7:17345600-17379200 Weak transcription Gastric stomach
23 chr7:17346600-17358400 Weak transcription Right Ventricle heart
24 chr7:17346600-17382200 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr7:17346800-17350800 Weak transcription Primary hematopoietic stem cells blood
26 chr7:17347000-17350600 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr7:17347000-17358600 Weak transcription Brain Anterior Caudate brain
28 chr7:17347000-17379200 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr7:17347200-17351400 Weak transcription HSMMtube muscle
30 chr7:17347400-17349800 Weak transcription Hela-S3 cervix
31 chr7:17347400-17350400 Weak transcription HUVEC blood vessel
32 chr7:17347400-17350800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr7:17347400-17351600 Weak transcription Brain Substantia Nigra brain
34 chr7:17347400-17384800 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr7:17347600-17350400 Weak transcription NHLF lung
36 chr7:17347600-17350600 Weak transcription HMEC breast
37 chr7:17347600-17351000 Weak transcription H1 Cell Line embryonic stem cell
38 chr7:17347600-17351200 Weak transcription NHEK skin
39 chr7:17347600-17352200 Weak transcription Brain Inferior Temporal Lobe brain
40 chr7:17347600-17354000 Weak transcription Brain Cingulate Gyrus brain
41 chr7:17347600-17357400 Weak transcription Rectal Smooth Muscle rectum
42 chr7:17347600-17371000 Weak transcription Brain Angular Gyrus brain
43 chr7:17347600-17389800 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr7:17347800-17350400 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr7:17347800-17350800 Weak transcription iPS-20b Cell Line embryonic stem cell
46 chr7:17347800-17350800 Weak transcription Primary T cells from cord blood blood
47 chr7:17347800-17351800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr7:17347800-17353600 Weak transcription Brain Hippocampus Middle brain
49 chr7:17347800-17356000 Weak transcription Pancreas Pancrea
50 chr7:17347800-17358400 Weak transcription Left Ventricle heart

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