The 2.0 version of rSNPBase

Variant report

Variant rs17787430
Chromosome Location chr4:57929982-57929983
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:57899600-57942200 Weak transcription Primary hematopoietic stem cells blood
2 chr4:57915800-57930200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
3 chr4:57917600-57931000 Weak transcription Pancreas Pancrea
4 chr4:57918600-57936800 Weak transcription Monocytes-CD14+_RO01746 blood
5 chr4:57920400-57930200 Weak transcription Lung lung
6 chr4:57921000-57931000 Weak transcription NHEK skin
7 chr4:57922800-57931200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr4:57923000-57930200 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr4:57923000-57931000 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr4:57923000-57931800 Weak transcription Duodenum Mucosa Duodenum
11 chr4:57923000-57932000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr4:57923800-57937200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr4:57924000-57931200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr4:57924200-57931200 Weak transcription Spleen Spleen
15 chr4:57926000-57931800 Genic enhancers HSMMtube muscle
16 chr4:57926400-57930800 Enhancers Fetal Kidney kidney
17 chr4:57926600-57932600 Enhancers Fetal Adrenal Gland Adrenal Gland
18 chr4:57927000-57932600 Enhancers Left Ventricle heart
19 chr4:57927000-57937400 Weak transcription Small Intestine intestine
20 chr4:57927200-57930800 Enhancers NH-A brain
21 chr4:57927400-57931000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr4:57927600-57931000 Enhancers Muscle Satellite Cultured Cells --
23 chr4:57927600-57931000 Enhancers NHDF-Ad bronchial
24 chr4:57927600-57932600 Enhancers Right Atrium heart
25 chr4:57927800-57931600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr4:57928000-57931000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr4:57928000-57931400 Weak transcription HMEC breast
28 chr4:57928200-57930200 Weak transcription Fetal Muscle Trunk muscle
29 chr4:57928200-57930600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr4:57928200-57931000 Enhancers NHLF lung
31 chr4:57928200-57932400 Enhancers Colon Smooth Muscle Colon
32 chr4:57928400-57930200 Weak transcription HSMM muscle
33 chr4:57928400-57932200 Enhancers Fetal Heart heart
34 chr4:57928400-57932600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr4:57928800-57932200 Enhancers Fetal Lung lung
36 chr4:57929000-57930000 Enhancers Liver Liver
37 chr4:57929000-57930600 Enhancers Ovary ovary
38 chr4:57929000-57931000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
39 chr4:57929000-57931400 Enhancers HUVEC blood vessel
40 chr4:57929000-57932000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr4:57929000-57932400 Enhancers Rectal Smooth Muscle rectum
42 chr4:57929200-57930600 Enhancers Psoas Muscle Psoas
43 chr4:57929200-57930800 Enhancers Osteobl bone
44 chr4:57929200-57931000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr4:57929200-57931200 Enhancers Brain Cingulate Gyrus brain
46 chr4:57929200-57931600 Enhancers Hela-S3 cervix
47 chr4:57929400-57930000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr4:57929400-57930000 Enhancers Brain Anterior Caudate brain
49 chr4:57929400-57930400 Enhancers Sigmoid Colon Sigmoid Colon
50 chr4:57929400-57931600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015