Variant report
| Variant | rs17788662 |
|---|---|
| Chromosome Location | chr3:53555607-53555608 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:53540600-53560000 | Weak transcription | Pancreas | Pancrea |
| 2 | chr3:53551400-53559000 | Weak transcription | Brain Hippocampus Middle | brain |
| 3 | chr3:53551400-53559800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 4 | chr3:53552400-53568400 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 5 | chr3:53552600-53560200 | Weak transcription | Lung | lung |
| 6 | chr3:53553200-53556200 | Weak transcription | Liver | Liver |
| 7 | chr3:53553200-53557000 | Weak transcription | Ovary | ovary |
| 8 | chr3:53553200-53557400 | Weak transcription | Spleen | Spleen |
| 9 | chr3:53553400-53556200 | Weak transcription | Colon Smooth Muscle | Colon |
| 10 | chr3:53553400-53557000 | Weak transcription | Fetal Stomach | stomach |
| 11 | chr3:53553400-53562800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 12 | chr3:53553600-53557200 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 13 | chr3:53554000-53556400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 14 | chr3:53554000-53558000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 15 | chr3:53554600-53557400 | Weak transcription | A549 | lung |
| 16 | chr3:53554800-53560400 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 17 | chr3:53555000-53558800 | Weak transcription | Fetal Brain Male | brain |
| 18 | chr3:53555000-53559000 | Strong transcription | Fetal Intestine Small | intestine |
| 19 | chr3:53555400-53558600 | Strong transcription | Fetal Intestine Large | intestine |
| 20 | chr3:53555600-53556400 | Strong transcription | Fetal Lung | lung |
| 21 | chr3:53555600-53559800 | Weak transcription | Hela-S3 | cervix |
