Variant report
Variant | rs17811822 |
---|---|
Chromosome Location | chr8:117838833-117838834 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:2 , 50 per page) page:
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rs_ID | r2[population] |
---|---|
rs12548062 | 0.92[ASN][1000 genomes] |
rs14795 | 1.00[CHB][hapmap] |
rs16889136 | 1.00[EUR][1000 genomes] |
rs17805852 | 1.00[CEU][hapmap] |
rs2241981 | 1.00[CHB][hapmap] |
rs2241982 | 1.00[CHB][hapmap] |
rs2921775 | 1.00[CHB][hapmap] |
rs2921784 | 1.00[CHB][hapmap] |
rs2921785 | 1.00[CHB][hapmap] |
rs2921787 | 1.00[CHB][hapmap] |
rs2921788 | 1.00[CHB][hapmap] |
rs2921789 | 1.00[CHB][hapmap] |
rs2921790 | 1.00[CHB][hapmap] |
rs2921791 | 1.00[CHB][hapmap] |
rs3020109 | 1.00[CHB][hapmap] |
rs3020111 | 1.00[CHB][hapmap] |
rs3020125 | 1.00[CHB][hapmap] |
rs3020133 | 1.00[CHB][hapmap] |
rs3020181 | 1.00[CHB][hapmap] |
rs35189908 | 0.81[ASN][1000 genomes] |
rs62510235 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes] |
rs62510236 | 0.94[AMR][1000 genomes];0.97[ASN][1000 genomes] |
rs62512680 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62512681 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62512682 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62512683 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62512686 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62512689 | 0.91[EUR][1000 genomes] |
rs62512690 | 0.91[EUR][1000 genomes] |
rs6996153 | 1.00[CHB][hapmap] |
rs73308285 | 0.95[ASN][1000 genomes] |
rs73308288 | 0.90[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv530386 | chr8:117509968-118391406 | Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 37 gene(s) | inside rSNPs | diseases |
2 | nsv831434 | chr8:117784467-117977825 | Flanking Active TSS Genic enhancers Weak transcription Enhancers Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 17 gene(s) | inside rSNPs | diseases |
3 | nsv1027259 | chr8:117790928-117842055 | Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Active TSS | Chromatin interactive region | 4 gene(s) | inside rSNPs | diseases |
4 | nsv1034015 | chr8:117790928-117843979 | Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Active TSS | Chromatin interactive region | 4 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:117838600-117839400 | Enhancers | Psoas Muscle | Psoas |