Variant report

Variant rs17819036
Chromosome Location chr15:55518294-55518295
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:55489800-55540200 Weak transcription Esophagus oesophagus
2 chr15:55490000-55529400 Weak transcription Rectal Smooth Muscle rectum
3 chr15:55490000-55562800 Weak transcription Ovary ovary
4 chr15:55497800-55518400 Weak transcription Gastric stomach
5 chr15:55508600-55522600 Weak transcription Colon Smooth Muscle Colon
6 chr15:55509400-55541600 Weak transcription Small Intestine intestine
7 chr15:55510400-55522600 Strong transcription Breast Myoepithelial Primary Cells Breast
8 chr15:55510400-55525000 Weak transcription Fetal Muscle Trunk muscle
9 chr15:55510400-55528000 Weak transcription Brain Inferior Temporal Lobe brain
10 chr15:55510600-55523800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr15:55510800-55521000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr15:55512800-55541600 Weak transcription Colonic Mucosa Colon
13 chr15:55513400-55532400 Weak transcription Left Ventricle heart
14 chr15:55514000-55518600 Strong transcription Rectal Mucosa Donor 31 rectum
15 chr15:55514200-55518600 Strong transcription Stomach Smooth Muscle stomach
16 chr15:55514200-55521400 Weak transcription HUVEC blood vessel
17 chr15:55514200-55522000 Weak transcription NH-A brain
18 chr15:55514200-55522200 Weak transcription Muscle Satellite Cultured Cells --
19 chr15:55514200-55523000 Weak transcription NHEK skin
20 chr15:55514200-55532000 Weak transcription Lung lung
21 chr15:55514200-55532600 Weak transcription Psoas Muscle Psoas
22 chr15:55514200-55540400 Weak transcription Placenta Amnion Placenta Amnion
23 chr15:55514200-55545200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr15:55514400-55519600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr15:55514400-55521800 Weak transcription Fetal Brain Female brain
26 chr15:55514400-55541200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr15:55514600-55522400 Weak transcription HMEC breast
28 chr15:55514600-55522600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr15:55514600-55534200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr15:55514600-55542600 Weak transcription Hela-S3 cervix
31 chr15:55514600-55543200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr15:55514800-55522400 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr15:55514800-55532600 Weak transcription Adipose Nuclei Adipose
34 chr15:55514800-55539800 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr15:55514800-55560400 Weak transcription Spleen Spleen
36 chr15:55515000-55518600 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
37 chr15:55515200-55522200 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr15:55515400-55518400 Weak transcription Dnd41 blood
39 chr15:55515400-55526200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr15:55515600-55518800 Genic enhancers Primary hematopoietic stem cells short term culture blood
41 chr15:55515600-55520200 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr15:55515600-55520400 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr15:55516000-55524600 Genic enhancers Primary neutrophils fromperipheralblood blood
44 chr15:55516000-55559600 Weak transcription Fetal Stomach stomach
45 chr15:55516200-55529400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr15:55516400-55518600 Genic enhancers Primary monocytes fromperipheralblood blood
47 chr15:55517200-55518600 Strong transcription Placenta Placenta
48 chr15:55517200-55518800 Strong transcription Aorta Aorta
49 chr15:55517200-55519200 Strong transcription Fetal Adrenal Gland Adrenal Gland
50 chr15:55517200-55520800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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