Variant report

Variant rs17822210
Chromosome Location chr2:180542062-180542063
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:180537400-180542400 Weak transcription Fetal Intestine Large intestine
2 chr2:180540400-180571200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr2:180540600-180543000 Weak transcription Pancreas Pancrea
4 chr2:180541200-180542200 Enhancers Duodenum Smooth Muscle Duodenum
5 chr2:180541200-180542200 Enhancers Psoas Muscle Psoas
6 chr2:180541200-180542600 Enhancers Liver Liver
7 chr2:180541200-180543000 Enhancers Skeletal Muscle Female skeletal muscle
8 chr2:180541200-180543200 Enhancers Fetal Lung lung
9 chr2:180541200-180543800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr2:180541200-180544000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
11 chr2:180541400-180542200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
12 chr2:180541400-180542200 Enhancers Brain Angular Gyrus brain
13 chr2:180541400-180542200 Enhancers Fetal Brain Female brain
14 chr2:180541400-180542400 Enhancers Muscle Satellite Cultured Cells --
15 chr2:180541400-180542600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr2:180541400-180542600 Enhancers Brain Anterior Caudate brain
17 chr2:180541400-180542600 Enhancers HSMM muscle
18 chr2:180541400-180543200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr2:180541400-180543200 Enhancers Colon Smooth Muscle Colon
20 chr2:180541600-180542200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr2:180541600-180542800 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr2:180541600-180543000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr2:180541800-180542200 Enhancers Breast Myoepithelial Primary Cells Breast
24 chr2:180541800-180542200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
25 chr2:180541800-180543000 Weak transcription Left Ventricle heart
26 chr2:180542000-180542200 Flanking Active TSS Fetal Heart heart
27 chr2:180542000-180542800 Weak transcription Fetal Brain Male brain
28 chr2:180542000-180543000 Weak transcription Fetal Muscle Leg muscle
29 chr2:180542000-180543000 Enhancers HSMMtube muscle

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