The 2.0 version of rSNPBase

Variant report

Variant rs1782391
Chromosome Location chr1:95198184-95198185
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95168200-95200400 Weak transcription Pancreas Pancrea
2 chr1:95169400-95200400 Weak transcription Colonic Mucosa Colon
3 chr1:95173400-95200600 Weak transcription Right Atrium heart
4 chr1:95186200-95211400 Weak transcription Gastric stomach
5 chr1:95189800-95200400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:95190800-95198200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr1:95191000-95198200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
8 chr1:95191000-95198200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:95193200-95198200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr1:95193200-95200600 Weak transcription Stomach Mucosa stomach
11 chr1:95193200-95202200 Weak transcription Fetal Intestine Large intestine
12 chr1:95194000-95200400 Weak transcription Ovary ovary
13 chr1:95194000-95202800 Weak transcription Rectal Smooth Muscle rectum
14 chr1:95194200-95199200 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr1:95194200-95199400 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr1:95194200-95200400 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr1:95194200-95200600 Weak transcription Lung lung
18 chr1:95194200-95200800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr1:95194200-95200800 Weak transcription Spleen Spleen
20 chr1:95194400-95200600 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr1:95195200-95200400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr1:95195400-95200400 Weak transcription H9 Cell Line embryonic stem cell
23 chr1:95195400-95200400 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr1:95195400-95200400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr1:95195400-95200400 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr1:95195400-95200400 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr1:95195400-95200400 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr1:95195400-95200400 Weak transcription HUVEC blood vessel
29 chr1:95195400-95200600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:95195400-95200600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr1:95195400-95200600 Weak transcription Adipose Nuclei Adipose
32 chr1:95195600-95200600 Weak transcription Hela-S3 cervix
33 chr1:95195800-95199400 Weak transcription HUES48 Cell Line embryonic stem cell
34 chr1:95196000-95198200 Enhancers HMEC breast
35 chr1:95196600-95199200 Weak transcription Fetal Intestine Small intestine
36 chr1:95196600-95199400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
37 chr1:95196600-95200400 Weak transcription Placenta Placenta
38 chr1:95197200-95198200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
39 chr1:95197200-95198200 Enhancers HSMM muscle
40 chr1:95197200-95200600 Weak transcription Fetal Stomach stomach
41 chr1:95197200-95200800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr1:95197400-95198200 Enhancers HSMMtube muscle
43 chr1:95197800-95198200 Enhancers Placenta Amnion Placenta Amnion
44 chr1:95197800-95200600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr1:95198000-95200200 Weak transcription NHEK skin
46 chr1:95198000-95200400 Weak transcription NHLF lung
47 chr1:95198000-95200600 Weak transcription NH-A brain
48 chr1:95198000-95200600 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015