The 2.0 version of rSNPBase

Variant report

Variant rs17828764
Chromosome Location chr4:102006957-102006958
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:101941200-102035600 Weak transcription Fetal Intestine Small intestine
2 chr4:101942600-102024400 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr4:101943800-102023400 Weak transcription Fetal Lung lung
4 chr4:101947800-102012600 Weak transcription Fetal Muscle Leg muscle
5 chr4:101953600-102015200 Weak transcription Fetal Intestine Large intestine
6 chr4:101959000-102023000 Weak transcription Muscle Satellite Cultured Cells --
7 chr4:101960800-102019800 Weak transcription Primary T cells fromperipheralblood blood
8 chr4:101961000-102024600 Weak transcription NHEK skin
9 chr4:101961200-102024600 Weak transcription Small Intestine intestine
10 chr4:101966600-102007800 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr4:101966800-102007800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr4:101978000-102024600 Weak transcription Left Ventricle heart
13 chr4:101978400-102023000 Weak transcription NHLF lung
14 chr4:101980000-102023200 Weak transcription NHDF-Ad bronchial
15 chr4:101981600-102010600 Weak transcription Aorta Aorta
16 chr4:101981800-102025000 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr4:101982000-102023000 Weak transcription Osteobl bone
18 chr4:101982400-102024400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr4:101986000-102010200 Weak transcription Psoas Muscle Psoas
20 chr4:101986200-102023000 Weak transcription Fetal Brain Female brain
21 chr4:101988000-102010800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr4:101988200-102024400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr4:101988400-102023800 Weak transcription Fetal Kidney kidney
24 chr4:101989400-102024600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr4:101990000-102014200 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr4:101991800-102015600 Weak transcription Placenta Placenta
27 chr4:101992400-102010000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr4:101992400-102010400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr4:101992400-102024600 Weak transcription Pancreas Pancrea
30 chr4:101992800-102023600 Weak transcription NH-A brain
31 chr4:101993000-102031600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr4:101993600-102010400 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr4:101994400-102007800 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr4:101994800-102029800 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr4:101995800-102009200 Weak transcription Fetal Brain Male brain
36 chr4:101996600-102024600 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr4:101997600-102023400 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr4:101997800-102012600 Weak transcription Brain Hippocampus Middle brain
39 chr4:101997800-102034600 Weak transcription HepG2 liver
40 chr4:101998600-102010000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr4:101999600-102025200 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr4:102000200-102007600 Weak transcription Primary neutrophils fromperipheralblood blood
43 chr4:102000400-102010200 Weak transcription Ovary ovary
44 chr4:102000600-102018800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr4:102000800-102023600 Weak transcription Fetal Stomach stomach
46 chr4:102000800-102024600 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr4:102000800-102032400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr4:102001200-102008000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr4:102002600-102023200 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr4:102002800-102030600 Weak transcription Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015