Variant report

Variant rs17846798
Chromosome Location chr6:32150498-32150499
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32146800-32156600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr6:32147000-32152000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr6:32147000-32152400 Genic enhancers Fetal Adrenal Gland Adrenal Gland
4 chr6:32147200-32150800 Weak transcription HSMM muscle
5 chr6:32147200-32152000 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr6:32147200-32152400 Genic enhancers Primary T helper cells fromperipheralblood blood
7 chr6:32147200-32156400 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr6:32147400-32150800 Weak transcription Muscle Satellite Cultured Cells --
9 chr6:32147400-32151800 Strong transcription HUES64 Cell Line embryonic stem cell
10 chr6:32147400-32152000 Strong transcription HUES6 Cell Line embryonic stem cell
11 chr6:32147400-32152000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr6:32147400-32153800 Weak transcription Fetal Kidney kidney
13 chr6:32147400-32153800 Weak transcription HUVEC blood vessel
14 chr6:32147400-32154400 Weak transcription NHDF-Ad bronchial
15 chr6:32147600-32150600 Weak transcription GM12878-XiMat blood
16 chr6:32147600-32150800 Strong transcription H9 Cell Line embryonic stem cell
17 chr6:32147600-32151200 Strong transcription Fetal Lung lung
18 chr6:32147600-32151400 Strong transcription Brain Inferior Temporal Lobe brain
19 chr6:32147600-32151800 Strong transcription H1 Cell Line embryonic stem cell
20 chr6:32147600-32151800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr6:32147600-32152000 Strong transcription iPS-20b Cell Line embryonic stem cell
22 chr6:32147600-32152200 Genic enhancers Right Ventricle heart
23 chr6:32147600-32152400 Strong transcription Brain Cingulate Gyrus brain
24 chr6:32147600-32152400 Strong transcription Osteobl bone
25 chr6:32147600-32152600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr6:32147600-32153200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr6:32147600-32155000 Genic enhancers Primary T helper cells PMA-I stimulated --
28 chr6:32147600-32155000 Weak transcription Brain Substantia Nigra brain
29 chr6:32147600-32156200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr6:32147600-32156200 Genic enhancers Primary T cells fromperipheralblood blood
31 chr6:32147800-32150800 Strong transcription iPS-15b Cell Line embryonic stem cell
32 chr6:32147800-32151000 Genic enhancers Monocytes-CD14+_RO01746 blood
33 chr6:32147800-32151600 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr6:32147800-32151600 Strong transcription Rectal Smooth Muscle rectum
35 chr6:32147800-32151800 Strong transcription HUES48 Cell Line embryonic stem cell
36 chr6:32147800-32152200 Strong transcription Rectal Mucosa Donor 29 rectum
37 chr6:32147800-32152400 Strong transcription Cortex derived primary cultured neurospheres brain
38 chr6:32147800-32152400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr6:32147800-32152400 Genic enhancers Lung lung
40 chr6:32147800-32152600 Strong transcription Thymus Thymus
41 chr6:32148000-32150800 Strong transcription Fetal Stomach stomach
42 chr6:32148000-32150800 Genic enhancers Skeletal Muscle Female skeletal muscle
43 chr6:32148000-32151000 Strong transcription Adipose Nuclei Adipose
44 chr6:32148000-32151200 Strong transcription Fetal Muscle Trunk muscle
45 chr6:32148000-32151400 Strong transcription iPS DF 19.11 Cell Line embryonic stem cell
46 chr6:32148000-32151600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr6:32148000-32151600 Strong transcription Fetal Intestine Large intestine
48 chr6:32148000-32151800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr6:32148000-32152000 Strong transcription HepG2 liver
50 chr6:32148000-32152200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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