Variant report

Variant	rs17862355
Chromosome Location	chr7:126970135-126970136
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11563463	0.89[CEU][hapmap];0.95[CHB][hapmap];0.83[JPT][hapmap]
rs11563627	0.89[CEU][hapmap];0.95[CHB][hapmap]
rs11772745	0.89[CEU][hapmap];0.83[JPT][hapmap]
rs12056134	0.88[CEU][hapmap];0.94[CHB][hapmap];0.83[JPT][hapmap];0.81[ASN][1000 genomes]
rs1361943	0.89[CEU][hapmap];0.95[CHB][hapmap];0.83[JPT][hapmap]
rs17874842	0.89[CEU][hapmap];0.95[CHB][hapmap];0.82[JPT][hapmap]
rs6956825	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6973848	0.89[CEU][hapmap];0.95[CHB][hapmap];0.82[JPT][hapmap];0.81[ASN][1000 genomes]
rs951809	0.89[CEU][hapmap];0.95[CHB][hapmap];0.83[JPT][hapmap]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:126969400-126971000	Enhancers	Rectal Mucosa Donor 31	rectum
2	chr7:126969600-126971000	Enhancers	Sigmoid Colon	Sigmoid Colon
3	chr7:126969800-126970800	Active TSS	Rectal Mucosa Donor 29	rectum

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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