Variant report
Variant | rs17865206 |
---|---|
Chromosome Location | chr7:126845773-126845774 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
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(count:2 , 50 per page) page:
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rs_ID | r2[population] |
---|---|
rs12706769 | 0.88[YRI][hapmap] |
rs17866227 | 0.89[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs17866228 | 0.89[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs17867034 | 0.89[YRI][hapmap] |
rs17868696 | 0.88[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs3808117 | 1.00[YRI][hapmap] |
rs6965293 | 0.89[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7784674 | 0.88[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv889189 | chr7:126699088-126963028 | Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
2 | esv2761367 | chr7:126717157-126865324 | Enhancers ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
3 | nsv889190 | chr7:126841090-126856057 | Enhancers Weak transcription Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
No data |