Variant report

Variant rs17882106
Chromosome Location chr12:48294413-48294414
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:48262000-48296800 Weak transcription Aorta Aorta
2 chr12:48277200-48295000 Weak transcription Rectal Smooth Muscle rectum
3 chr12:48286800-48298000 Weak transcription Right Atrium heart
4 chr12:48290800-48296400 Weak transcription Muscle Satellite Cultured Cells --
5 chr12:48290800-48297400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr12:48291000-48297000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr12:48291400-48297000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr12:48293000-48296800 Enhancers Fetal Intestine Large intestine
9 chr12:48293000-48297200 Enhancers Primary T helper cells PMA-I stimulated --
10 chr12:48293200-48294800 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr12:48293200-48295800 Enhancers Primary T cells from cord blood blood
12 chr12:48293200-48297000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr12:48293200-48297400 Enhancers Primary T helper naive cells from peripheral blood blood
14 chr12:48293200-48297400 Enhancers Primary T helper cells fromperipheralblood blood
15 chr12:48293200-48297400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr12:48293200-48297600 Enhancers Primary T helper naive cells fromperipheralblood blood
17 chr12:48293400-48294600 Genic enhancers NHEK skin
18 chr12:48293400-48294600 Strong transcription NHLF lung
19 chr12:48293400-48294800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr12:48293400-48295200 Genic enhancers Fetal Intestine Small intestine
21 chr12:48293400-48296400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr12:48293400-48296400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
23 chr12:48293400-48297200 Enhancers Primary hematopoietic stem cells short term culture blood
24 chr12:48293400-48297400 Enhancers Esophagus oesophagus
25 chr12:48293400-48297600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
26 chr12:48293400-48297600 Enhancers Lung lung
27 chr12:48293400-48297800 Bivalent Enhancer Primary T cells fromperipheralblood blood
28 chr12:48293400-48297800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
29 chr12:48293400-48298200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
30 chr12:48293400-48298400 Enhancers Gastric stomach
31 chr12:48293400-48298400 Enhancers Stomach Mucosa stomach
32 chr12:48293600-48294800 Bivalent Enhancer Primary B cells from peripheral blood blood
33 chr12:48293600-48295000 Enhancers Placenta Amnion Placenta Amnion
34 chr12:48293600-48295200 Flanking Active TSS Duodenum Mucosa Duodenum
35 chr12:48293600-48295400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
36 chr12:48293600-48296600 Enhancers Primary T helper 17 cells PMA-I stimulated --
37 chr12:48293600-48297000 Enhancers Primary B cells from cord blood blood
38 chr12:48293600-48297200 Enhancers Primary monocytes fromperipheralblood blood
39 chr12:48293600-48297400 Enhancers Primary T killer memory cells from peripheral blood blood
40 chr12:48293600-48297800 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
41 chr12:48293600-48297800 Enhancers Primary T killer naive cells fromperipheralblood blood
42 chr12:48293800-48294600 Enhancers Liver Liver
43 chr12:48293800-48295600 Enhancers GM12878-XiMat blood
44 chr12:48293800-48296800 Enhancers Primary hematopoietic stem cells blood
45 chr12:48293800-48297000 Weak transcription Small Intestine intestine
46 chr12:48294000-48294600 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr12:48294000-48294800 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr12:48294000-48295000 Enhancers HepG2 liver
49 chr12:48294000-48295400 Enhancers Placenta Placenta
50 chr12:48294000-48296000 Weak transcription Sigmoid Colon Sigmoid Colon

Quick Search:


  
Input of quick search could be:

what's new

Quick links