Variant report

Variant rs17882808
Chromosome Location chr4:187070937-187070938
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:187065600-187079000 Weak transcription Spleen Spleen
2 chr4:187066800-187072800 Weak transcription Lung lung
3 chr4:187066800-187074600 Weak transcription Brain Germinal Matrix brain
4 chr4:187066800-187078800 Weak transcription Esophagus oesophagus
5 chr4:187066800-187078800 Weak transcription Right Ventricle heart
6 chr4:187066800-187079000 Weak transcription Aorta Aorta
7 chr4:187067000-187071000 Weak transcription Pancreas Pancrea
8 chr4:187067000-187071200 Weak transcription Ovary ovary
9 chr4:187067000-187072800 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr4:187067000-187072800 Weak transcription Fetal Intestine Large intestine
11 chr4:187067000-187073000 Weak transcription Gastric stomach
12 chr4:187067000-187083600 Weak transcription Brain Substantia Nigra brain
13 chr4:187067200-187091800 Weak transcription Colon Smooth Muscle Colon
14 chr4:187067400-187088000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr4:187067600-187071000 Weak transcription Stomach Smooth Muscle stomach
16 chr4:187067600-187081400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr4:187067600-187085800 Weak transcription Colonic Mucosa Colon
18 chr4:187067800-187071000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr4:187067800-187074400 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr4:187068000-187071000 Weak transcription Brain Anterior Caudate brain
21 chr4:187068200-187071000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr4:187068200-187071200 Weak transcription Brain Cingulate Gyrus brain
23 chr4:187068200-187072000 Weak transcription Brain Inferior Temporal Lobe brain
24 chr4:187068400-187078400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr4:187068600-187072400 Weak transcription Fetal Brain Female brain
26 chr4:187068600-187084400 Weak transcription Brain Angular Gyrus brain
27 chr4:187069000-187072600 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr4:187069200-187071600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr4:187069800-187071400 Enhancers Fetal Lung lung
30 chr4:187070000-187071000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
31 chr4:187070200-187071400 Enhancers Liver Liver
32 chr4:187070200-187081000 Weak transcription Fetal Brain Male brain
33 chr4:187070600-187071000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr4:187070600-187071200 Flanking Active TSS Fetal Kidney kidney
35 chr4:187070600-187071200 Enhancers Fetal Muscle Leg muscle
36 chr4:187070600-187071400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr4:187070600-187071400 Enhancers Left Ventricle heart
38 chr4:187070600-187071600 Flanking Active TSS Adipose Nuclei Adipose
39 chr4:187070600-187073800 Strong transcription Fetal Intestine Small intestine
40 chr4:187070600-187091200 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr4:187070800-187071000 Enhancers ES-I3 Cell Line embryonic stem cell
42 chr4:187070800-187071000 Enhancers iPS-15b Cell Line embryonic stem cell
43 chr4:187070800-187071000 Enhancers Placenta Placenta
44 chr4:187070800-187071200 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
45 chr4:187070800-187071200 Active TSS Brain Hippocampus Middle brain
46 chr4:187070800-187071200 Active TSS Duodenum Mucosa Duodenum
47 chr4:187070800-187071200 Enhancers Skeletal Muscle Male skeletal muscle
48 chr4:187070800-187071400 Enhancers HUES48 Cell Line embryonic stem cell
49 chr4:187070800-187071400 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr4:187070800-187071400 Active TSS Right Atrium heart

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