Variant report

Variant rs17883552
Chromosome Location chr7:100492357-100492358
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:100488200-100492600 Weak transcription Liver Liver
2 chr7:100488800-100492400 Weak transcription Lung lung
3 chr7:100488800-100492400 Weak transcription Right Atrium heart
4 chr7:100488800-100492600 Weak transcription Aorta Aorta
5 chr7:100488800-100492800 Weak transcription Small Intestine intestine
6 chr7:100489000-100492400 Weak transcription Left Ventricle heart
7 chr7:100489000-100492400 Weak transcription Pancreas Pancrea
8 chr7:100489000-100492400 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr7:100489000-100492600 Weak transcription Ovary ovary
10 chr7:100489200-100492400 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr7:100489200-100492800 Weak transcription Brain Substantia Nigra brain
12 chr7:100490000-100492400 Weak transcription NH-A brain
13 chr7:100491200-100493600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr7:100491400-100492400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr7:100491400-100492600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr7:100491600-100492400 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
17 chr7:100491600-100493400 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
18 chr7:100491800-100492400 Bivalent Enhancer Brain Germinal Matrix brain
19 chr7:100491800-100492400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
20 chr7:100491800-100492400 Enhancers Fetal Lung lung
21 chr7:100491800-100492600 Flanking Active TSS Fetal Muscle Leg muscle
22 chr7:100491800-100492600 Bivalent/Poised TSS Fetal Thymus thymus
23 chr7:100491800-100493600 Active TSS H9 Cell Line embryonic stem cell
24 chr7:100491800-100493600 Active TSS HSMM muscle
25 chr7:100491800-100493800 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
26 chr7:100491800-100495000 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
27 chr7:100492000-100492400 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
28 chr7:100492000-100492400 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr7:100492000-100492400 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
30 chr7:100492000-100492400 Flanking Bivalent TSS/Enh Duodenum Mucosa Duodenum
31 chr7:100492000-100492400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
32 chr7:100492000-100492400 Enhancers Right Ventricle heart
33 chr7:100492000-100492400 Enhancers A549 lung
34 chr7:100492000-100492600 Enhancers Placenta Placenta
35 chr7:100492000-100492600 Flanking Active TSS HSMMtube muscle
36 chr7:100492000-100492800 Active TSS Hela-S3 cervix
37 chr7:100492000-100493200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr7:100492000-100493400 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr7:100492000-100493600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr7:100492000-100493600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
41 chr7:100492000-100493600 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr7:100492000-100493800 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
43 chr7:100492000-100493800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
44 chr7:100492000-100494000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
45 chr7:100492200-100492400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr7:100492200-100492400 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
47 chr7:100492200-100492400 Bivalent Enhancer Primary T regulatory cells fromperipheralblood blood
48 chr7:100492200-100492400 Enhancers Primary T killer naive cells fromperipheralblood blood
49 chr7:100492200-100492400 Enhancers Muscle Satellite Cultured Cells --
50 chr7:100492200-100492400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain

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