Variant report

Variant rs1790106
Chromosome Location chr12:123591596-123591597
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:123561600-123604000 Genic enhancers Fetal Thymus thymus
2 chr12:123571200-123600000 Genic enhancers Thymus Thymus
3 chr12:123579800-123593600 Weak transcription Fetal Intestine Large intestine
4 chr12:123579800-123596200 Weak transcription Osteobl bone
5 chr12:123580000-123592600 Weak transcription NHEK skin
6 chr12:123580000-123593800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr12:123580200-123593200 Weak transcription Muscle Satellite Cultured Cells --
8 chr12:123580600-123596000 Weak transcription Placenta Amnion Placenta Amnion
9 chr12:123581000-123593000 Weak transcription Pancreas Pancrea
10 chr12:123581200-123593000 Weak transcription Brain Germinal Matrix brain
11 chr12:123581400-123591600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr12:123582800-123592600 Weak transcription Gastric stomach
13 chr12:123583000-123595800 Weak transcription NHDF-Ad bronchial
14 chr12:123583200-123599600 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr12:123583600-123591800 Weak transcription HSMMtube muscle
16 chr12:123583600-123592000 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr12:123584600-123593400 Weak transcription Colonic Mucosa Colon
18 chr12:123584800-123591800 Weak transcription Colon Smooth Muscle Colon
19 chr12:123586000-123592600 Enhancers iPS-15b Cell Line embryonic stem cell
20 chr12:123586800-123592200 Enhancers HepG2 liver
21 chr12:123587200-123591600 Enhancers Primary T cells from cord blood blood
22 chr12:123587200-123595600 Enhancers Liver Liver
23 chr12:123588000-123599000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr12:123588200-123592000 Weak transcription NHLF lung
25 chr12:123588200-123592800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr12:123588200-123593200 Weak transcription Ovary ovary
27 chr12:123589400-123592000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr12:123589400-123592000 Enhancers HUES64 Cell Line embryonic stem cell
29 chr12:123589400-123592200 Enhancers H1 Cell Line embryonic stem cell
30 chr12:123589400-123592200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr12:123589400-123592200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr12:123589400-123592800 Enhancers ES-WA7 Cell Line embryonic stem cell
33 chr12:123589400-123593000 Enhancers Primary mononuclear cells fromperipheralblood Blood
34 chr12:123589400-123593000 Enhancers Placenta Placenta
35 chr12:123589400-123594200 Enhancers Primary Natural Killer cells fromperipheralblood blood
36 chr12:123589400-123595400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr12:123589600-123592200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
38 chr12:123589600-123593600 Enhancers Primary monocytes fromperipheralblood blood
39 chr12:123589600-123595200 Enhancers Skeletal Muscle Female skeletal muscle
40 chr12:123589800-123592200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
41 chr12:123590000-123592000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr12:123590000-123592400 Enhancers HUVEC blood vessel
43 chr12:123590000-123592600 Enhancers ES-I3 Cell Line embryonic stem cell
44 chr12:123590000-123593800 Enhancers Fetal Heart heart
45 chr12:123590000-123595200 Strong transcription Fetal Intestine Small intestine
46 chr12:123590000-123596600 Enhancers Right Ventricle heart
47 chr12:123590000-123598200 Enhancers Right Atrium heart
48 chr12:123590000-123603800 Enhancers Left Ventricle heart
49 chr12:123590200-123592200 Genic enhancers Brain Dorsolateral Prefrontal Cortex brain
50 chr12:123590200-123592600 Enhancers Primary B cells from peripheral blood blood

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