Variant report

Variant rs1797679
Chromosome Location chr12:65049191-65049192
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:65025000-65059600 Weak transcription Thymus Thymus
2 chr12:65028600-65056400 Weak transcription NHEK skin
3 chr12:65033000-65052600 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr12:65033600-65059400 Weak transcription Primary hematopoietic stem cells blood
5 chr12:65038200-65051200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr12:65041400-65050400 Enhancers Primary T helper naive cells fromperipheralblood blood
7 chr12:65041600-65052200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr12:65043600-65059600 Enhancers Primary T helper 17 cells PMA-I stimulated --
9 chr12:65044000-65059400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr12:65044200-65051400 Weak transcription Colonic Mucosa Colon
11 chr12:65044600-65051000 Weak transcription Fetal Muscle Trunk muscle
12 chr12:65044800-65050200 Weak transcription Fetal Muscle Leg muscle
13 chr12:65044800-65050400 Enhancers Primary T helper cells fromperipheralblood blood
14 chr12:65045000-65051000 Weak transcription GM12878-XiMat blood
15 chr12:65045200-65050200 Enhancers Primary T cells from cord blood blood
16 chr12:65045600-65054600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr12:65045800-65051000 Weak transcription Gastric stomach
18 chr12:65045800-65056400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr12:65046400-65050200 Weak transcription Duodenum Mucosa Duodenum
20 chr12:65046400-65058600 Weak transcription Ovary ovary
21 chr12:65046600-65050200 Enhancers Primary T regulatory cells fromperipheralblood blood
22 chr12:65046600-65051800 Weak transcription Stomach Smooth Muscle stomach
23 chr12:65046800-65049800 Weak transcription HUVEC blood vessel
24 chr12:65046800-65050000 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr12:65046800-65050000 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr12:65047000-65049800 Enhancers Placenta Placenta
27 chr12:65047000-65050800 Weak transcription Right Atrium heart
28 chr12:65047000-65051400 Weak transcription Rectal Smooth Muscle rectum
29 chr12:65047000-65056400 Weak transcription Primary monocytes fromperipheralblood blood
30 chr12:65047000-65059400 Weak transcription H9 Cell Line embryonic stem cell
31 chr12:65047200-65051200 Weak transcription Spleen Spleen
32 chr12:65047200-65059400 Weak transcription Fetal Stomach stomach
33 chr12:65047400-65059400 Enhancers Primary T helper cells PMA-I stimulated --
34 chr12:65047600-65049200 Enhancers HSMM muscle
35 chr12:65047800-65049200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr12:65047800-65049200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr12:65047800-65049600 Weak transcription Primary B cells from peripheral blood blood
38 chr12:65047800-65050400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr12:65047800-65050600 Weak transcription Colon Smooth Muscle Colon
40 chr12:65047800-65050800 Weak transcription Lung lung
41 chr12:65047800-65051200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr12:65047800-65051600 Weak transcription Aorta Aorta
43 chr12:65047800-65051600 Weak transcription Right Ventricle heart
44 chr12:65047800-65051800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr12:65047800-65052600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr12:65047800-65056000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr12:65047800-65056400 Weak transcription Hela-S3 cervix
48 chr12:65047800-65056600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr12:65047800-65059400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr12:65047800-65059400 Weak transcription NHLF lung

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