The 2.0 version of rSNPBase

Variant report

Variant rs1805769
Chromosome Location chr12:9090158-9090159
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:9068200-9091400 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr12:9068200-9094200 Weak transcription Colonic Mucosa Colon
3 chr12:9068200-9094200 Weak transcription Lung lung
4 chr12:9068200-9094200 Weak transcription Psoas Muscle Psoas
5 chr12:9068200-9094200 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr12:9068200-9094200 Weak transcription Small Intestine intestine
7 chr12:9068200-9100000 Weak transcription Stomach Mucosa stomach
8 chr12:9069000-9094200 Weak transcription NHLF lung
9 chr12:9069400-9094000 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr12:9069400-9094200 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr12:9069600-9092000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr12:9070400-9092000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr12:9070400-9092000 Strong transcription Fetal Muscle Trunk muscle
14 chr12:9070600-9092000 Strong transcription Stomach Smooth Muscle stomach
15 chr12:9070600-9092600 Strong transcription HUES6 Cell Line embryonic stem cell
16 chr12:9070600-9092600 Strong transcription iPS-15b Cell Line embryonic stem cell
17 chr12:9071000-9092000 Strong transcription Fetal Muscle Leg muscle
18 chr12:9071400-9099400 Strong transcription HUES48 Cell Line embryonic stem cell
19 chr12:9071600-9092000 Strong transcription H9 Cell Line embryonic stem cell
20 chr12:9071600-9092000 Strong transcription iPS-20b Cell Line embryonic stem cell
21 chr12:9071600-9100000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr12:9072400-9092000 Strong transcription iPS-18 Cell Line embryonic stem cell
23 chr12:9072400-9094200 Weak transcription NHEK skin
24 chr12:9072800-9091000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr12:9072800-9094200 Weak transcription HSMM muscle
26 chr12:9073800-9099800 Strong transcription HUES64 Cell Line embryonic stem cell
27 chr12:9074200-9093800 Weak transcription Muscle Satellite Cultured Cells --
28 chr12:9074400-9094000 Weak transcription HUVEC blood vessel
29 chr12:9074600-9094000 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr12:9075400-9092000 Strong transcription H1 Cell Line embryonic stem cell
31 chr12:9075800-9094000 Weak transcription HMEC breast
32 chr12:9076000-9091400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr12:9076200-9092000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr12:9078000-9095800 Weak transcription Fetal Heart heart
35 chr12:9079600-9092000 Strong transcription Primary T helper cells fromperipheralblood blood
36 chr12:9079800-9091400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr12:9079800-9091800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr12:9079800-9092000 Strong transcription Breast Myoepithelial Primary Cells Breast
39 chr12:9080200-9091800 Strong transcription Fetal Thymus thymus
40 chr12:9080800-9092600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr12:9081000-9092000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
42 chr12:9081000-9092000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr12:9081200-9092000 Strong transcription Primary T helper cells PMA-I stimulated --
44 chr12:9081200-9092600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr12:9082200-9091800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr12:9082200-9091800 Strong transcription Fetal Stomach stomach
47 chr12:9082400-9091800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr12:9082600-9091800 Strong transcription Primary hematopoietic stem cells short term culture blood
49 chr12:9082600-9092000 Strong transcription Left Ventricle heart
50 chr12:9083600-9092000 Strong transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015