Variant report

Variant	rs180712386
Chromosome Location	chr7:68923690-68923691
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023885	chr7:68894896-69158290	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv538915	chr7:68894896-69158290	Weak transcription Bivalent Enhancer Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
3	esv3358576	chr7:68923091-68925539	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	inside rSNPs	diseases
4	esv3419827	chr7:68923616-68925114	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:68914000-68925600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr7:68922200-68923800	Enhancers	Fetal Muscle Leg	muscle
3	chr7:68922400-68923800	Enhancers	Fetal Muscle Trunk	muscle
4	chr7:68922600-68923800	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr7:68923000-68923800	Enhancers	Ovary	ovary
6	chr7:68923000-68923800	Enhancers	Skeletal Muscle Male	skeletal muscle
7	chr7:68923400-68923800	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr7:68923400-68934400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
9	chr7:68923600-68923800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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