Variant report

Variant	rs180781830
Chromosome Location	chr7:16172063-16172064
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 66 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:66 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016642	chr7:15884061-16799788	Genic enhancers Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
2	nsv949309	chr7:15986709-16236162	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv949555	chr7:16078412-16279290	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
4	nsv1035015	chr7:16144928-16273061	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
5	esv1847175	chr7:16155335-16272661	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
6	esv1846736	chr7:16168502-16173482	Weak transcription Active TSS Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv1844385	chr7:16168502-16211553	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
8	nsv511373	chr7:16168708-16182966	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
9	nsv948950	chr7:16168925-16395434	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
10	esv3475253	chr7:16169827-16176025	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
11	esv3362076	chr7:16170527-16175225	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3475254	chr7:16170952-16175300	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv3448338	chr7:16170977-16175475	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
14	nsv820033	chr7:16171159-16174512	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
15	esv3475258	chr7:16171321-16174390	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
16	nsv511950	chr7:16171351-16174471	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
17	esv9042	chr7:16171513-16174322	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
18	esv3475257	chr7:16171527-16174575	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
19	esv3475256	chr7:16171643-16174160	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
20	esv3409386	chr7:16171674-16174177	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
21	esv3475259	chr7:16171693-16174141	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
22	esv3475255	chr7:16171696-16174145	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
23	esv3518499	chr7:16171704-16174171	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
24	esv3475261	chr7:16171707-16174100	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
25	esv3518498	chr7:16171717-16174144	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
26	esv3518500	chr7:16171717-16174144	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
27	esv3398661	chr7:16171735-16174092	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
28	esv5024	chr7:16171737-16174154	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
29	esv3475260	chr7:16171760-16174077	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
30	nsv366243	chr7:16171774-16174072	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
31	esv3475262	chr7:16171774-16174073	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
32	nsv824017	chr7:16171777-16173693	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
33	nsv821416	chr7:16171777-16173975	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
34	nsv824018	chr7:16171777-16174322	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
35	esv12269	chr7:16171796-16173975	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
36	esv1797523	chr7:16171859-16173482	Weak transcription	n/a	n/a	inside rSNPs	diseases
37	esv1801424	chr7:16171859-16173482	Weak transcription	n/a	n/a	inside rSNPs	diseases
38	esv1846421	chr7:16171859-16173482	Weak transcription	n/a	n/a	inside rSNPs	diseases
39	esv1849187	chr7:16171859-16173482	Weak transcription	n/a	n/a	inside rSNPs	diseases
40	nsv606312	chr7:16171859-16173482	Weak transcription	n/a	n/a	inside rSNPs	diseases
41	esv1801939	chr7:16171859-16173590	Weak transcription	n/a	n/a	inside rSNPs	diseases
42	esv1845520	chr7:16171859-16173590	Weak transcription	n/a	n/a	inside rSNPs	diseases
43	nsv606313	chr7:16171859-16173590	Weak transcription	n/a	n/a	inside rSNPs	diseases
44	esv1800408	chr7:16171859-16173952	Weak transcription	n/a	n/a	inside rSNPs	diseases
45	esv1801593	chr7:16171859-16173952	Weak transcription	n/a	n/a	inside rSNPs	diseases
46	esv1801992	chr7:16171859-16173952	Weak transcription	n/a	n/a	inside rSNPs	diseases
47	esv1843054	chr7:16171859-16173952	Weak transcription	n/a	n/a	inside rSNPs	diseases
48	esv1847163	chr7:16171859-16173952	Weak transcription	n/a	n/a	inside rSNPs	diseases
49	nsv606314	chr7:16171859-16173952	Weak transcription	n/a	n/a	inside rSNPs	diseases
50	esv1796070	chr7:16172022-16173482	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:16169800-16183800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr7:16170800-16174800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr7:16170800-16175400	Weak transcription	HSMMtube	muscle
4	chr7:16171000-16174800	Weak transcription	NHDF-Ad	bronchial
5	chr7:16171400-16175400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr7:16171800-16174400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr7:16171800-16174800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

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