The 2.0 version of rSNPBase

Variant report

Variant rs180847743
Chromosome Location chr2:55361831-55361832
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55360400-55362000 Flanking Active TSS Primary T cells from cord blood blood
2 chr2:55360400-55362200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr2:55360600-55362000 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
4 chr2:55360600-55362000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
5 chr2:55360600-55362200 Enhancers H9 Cell Line embryonic stem cell
6 chr2:55360600-55362200 Enhancers Fetal Muscle Leg muscle
7 chr2:55360600-55362200 Enhancers Gastric stomach
8 chr2:55360600-55362200 Enhancers Sigmoid Colon Sigmoid Colon
9 chr2:55360600-55362200 Enhancers Spleen Spleen
10 chr2:55360800-55362000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
11 chr2:55360800-55362200 Enhancers Lung lung
12 chr2:55360800-55362200 Enhancers HUVEC blood vessel
13 chr2:55360800-55362400 Enhancers Placenta Placenta
14 chr2:55360800-55362600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
15 chr2:55361000-55362200 Enhancers ES-WA7 Cell Line embryonic stem cell
16 chr2:55361000-55362200 Enhancers H1 Cell Line embryonic stem cell
17 chr2:55361000-55362200 Enhancers HUES48 Cell Line embryonic stem cell
18 chr2:55361000-55362200 Enhancers Pancreas Pancrea
19 chr2:55361000-55362200 Enhancers NHLF lung
20 chr2:55361000-55362400 Enhancers Small Intestine intestine
21 chr2:55361000-55363000 Enhancers iPS-18 Cell Line embryonic stem cell
22 chr2:55361000-55364000 Weak transcription Left Ventricle heart
23 chr2:55361200-55362000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
24 chr2:55361200-55362000 Enhancers Fetal Adrenal Gland Adrenal Gland
25 chr2:55361200-55362000 Enhancers Fetal Muscle Trunk muscle
26 chr2:55361200-55362000 Enhancers HSMM muscle
27 chr2:55361200-55362200 Enhancers Breast Myoepithelial Primary Cells Breast
28 chr2:55361200-55362200 Enhancers Brain Angular Gyrus brain
29 chr2:55361200-55362200 Enhancers Ovary ovary
30 chr2:55361200-55362200 Enhancers Thymus Thymus
31 chr2:55361200-55362200 Enhancers Dnd41 blood
32 chr2:55361200-55364400 Weak transcription Right Ventricle heart
33 chr2:55361200-55365400 Enhancers Fetal Intestine Small intestine
34 chr2:55361400-55362000 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
35 chr2:55361400-55362000 Enhancers Fetal Stomach stomach
36 chr2:55361400-55362000 Enhancers Skeletal Muscle Female skeletal muscle
37 chr2:55361400-55362200 Enhancers Fetal Lung lung
38 chr2:55361400-55362200 Enhancers Skeletal Muscle Male skeletal muscle
39 chr2:55361400-55362400 Enhancers Fetal Thymus thymus
40 chr2:55361400-55366400 Enhancers Primary hematopoietic stem cells short term culture blood
41 chr2:55361400-55370200 Enhancers Fetal Intestine Large intestine
42 chr2:55361600-55362000 Enhancers Fetal Brain Female brain
43 chr2:55361600-55362000 Enhancers GM12878-XiMat blood
44 chr2:55361600-55362200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
45 chr2:55361600-55362200 Enhancers Primary neutrophils fromperipheralblood blood
46 chr2:55361600-55362200 Enhancers Primary T helper 17 cells PMA-I stimulated --
47 chr2:55361600-55362200 Enhancers Primary Natural Killer cells fromperipheralblood blood
48 chr2:55361600-55362200 Enhancers Cortex derived primary cultured neurospheres brain
49 chr2:55361600-55362200 Enhancers Primary mononuclear cells fromperipheralblood Blood
50 chr2:55361600-55362200 Enhancers Liver Liver

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Last update: Aug 31, 2015