Variant report

Variant	rs180916274
Chromosome Location	chr1:160934958-160934959
allele	A/C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530077	chr1:160836448-161284904	Enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	119 gene(s)	inside rSNPs	diseases
2	nsv548058	chr1:160925455-160989614	Flanking Active TSS Genic enhancers Active TSS Enhancers Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
3	esv3406753	chr1:160934328-160936376	Weak transcription	n/a	n/a	inside rSNPs	diseases
4	esv2642468	chr1:160934400-160936401	Weak transcription	n/a	n/a	inside rSNPs	diseases
5	esv8875	chr1:160934769-160935578	Weak transcription	n/a	n/a	inside rSNPs	diseases
6	esv3321623	chr1:160934828-160935876	Weak transcription	n/a	n/a	inside rSNPs	diseases
7	esv2238307	chr1:160934832-160935495	Weak transcription	n/a	n/a	inside rSNPs	diseases
8	esv3486406	chr1:160934889-160935430	Weak transcription	n/a	n/a	inside rSNPs	diseases
9	esv3419589	chr1:160934914-160935403	Weak transcription	n/a	n/a	inside rSNPs	diseases
10	esv3486405	chr1:160934918-160935373	Weak transcription	n/a	n/a	inside rSNPs	diseases
11	esv3486402	chr1:160934936-160935417	Weak transcription	n/a	n/a	inside rSNPs	diseases
12	esv3320758	chr1:160934946-160935402	Weak transcription	n/a	n/a	inside rSNPs	diseases
13	esv3320759	chr1:160934959-160935353	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:160931000-160942000	Weak transcription	H9 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links