Variant report

Variant rs180930759
Chromosome Location chr5:60627616-60627617
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60625200-60630800 Active TSS Colonic Mucosa Colon
2 chr5:60625400-60631000 Active TSS Brain Hippocampus Middle brain
3 chr5:60625600-60630600 Active TSS Colon Smooth Muscle Colon
4 chr5:60625600-60630800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr5:60625600-60630800 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
6 chr5:60625600-60631000 Active TSS Brain Anterior Caudate brain
7 chr5:60625800-60628800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
8 chr5:60625800-60628800 Active TSS Brain Germinal Matrix brain
9 chr5:60625800-60630000 Active TSS Fetal Lung lung
10 chr5:60625800-60630200 Active TSS Sigmoid Colon Sigmoid Colon
11 chr5:60625800-60630400 Active TSS Fetal Brain Female brain
12 chr5:60625800-60630800 Active TSS NHDF-Ad bronchial
13 chr5:60625800-60631000 Active TSS Pancreatic Islets Pancreatic Islet
14 chr5:60625800-60631000 Active TSS HSMM muscle
15 chr5:60626000-60627800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr5:60626000-60627800 Active TSS Fetal Heart heart
17 chr5:60626000-60628200 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
18 chr5:60626000-60629400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr5:60626000-60629600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr5:60626000-60629800 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
21 chr5:60626000-60629800 Active TSS Primary T cells from cord blood blood
22 chr5:60626000-60630000 Active TSS Psoas Muscle Psoas
23 chr5:60626000-60630000 Active TSS Rectal Smooth Muscle rectum
24 chr5:60626000-60630000 Active TSS Hela-S3 cervix
25 chr5:60626000-60630200 Active TSS Pancreas Pancrea
26 chr5:60626000-60630400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr5:60626000-60630600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
28 chr5:60626000-60630800 Active TSS Aorta Aorta
29 chr5:60626000-60630800 Active TSS Brain Inferior Temporal Lobe brain
30 chr5:60626000-60630800 Active TSS Ovary ovary
31 chr5:60626000-60630800 Active TSS Right Atrium heart
32 chr5:60626000-60631000 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr5:60626000-60631000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr5:60626000-60631200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
35 chr5:60626000-60631200 Active TSS Brain Cingulate Gyrus brain
36 chr5:60626000-60631200 Active TSS Right Ventricle heart
37 chr5:60626000-60631400 Active TSS Fetal Kidney kidney
38 chr5:60626000-60631600 Active TSS NHLF lung
39 chr5:60626200-60628200 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr5:60626200-60628800 Active TSS ES-UCSF4 Cell Line embryonic stem cell
41 chr5:60626200-60629400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
42 chr5:60626200-60629800 Active TSS H9 Cell Line embryonic stem cell
43 chr5:60626200-60629800 Active TSS Spleen Spleen
44 chr5:60626200-60630000 Active TSS Fetal Intestine Large intestine
45 chr5:60626200-60630000 Active TSS Rectal Mucosa Donor 29 rectum
46 chr5:60626200-60630200 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr5:60626200-60630200 Active TSS Duodenum Smooth Muscle Duodenum
48 chr5:60626200-60630200 Active TSS Gastric stomach
49 chr5:60626200-60630200 Active TSS Small Intestine intestine
50 chr5:60626200-60630200 Active TSS A549 lung

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