Variant report

Variant	rs180984067
Chromosome Location	chr13:51441788-51441789
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2753492	chr13:50550081-51461720	Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1256 gene(s)	inside rSNPs	diseases
2	nsv1037350	chr13:51272518-51447354	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv526999	chr13:51440933-51452751	Enhancers Weak transcription	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:51437800-51442800	Enhancers	Dnd41	blood
2	chr13:51438200-51442200	Enhancers	Fetal Thymus	thymus
3	chr13:51440400-51442000	Enhancers	Thymus	Thymus
4	chr13:51440400-51442200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr13:51441400-51442000	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr13:51441400-51442200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr13:51441600-51442000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr13:51441600-51442000	Enhancers	Brain Hippocampus Middle	brain
9	chr13:51441600-51442000	Enhancers	Brain Inferior Temporal Lobe	brain
10	chr13:51441600-51442200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr13:51441600-51442200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr13:51441600-51442200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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