| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1007188 |
chr2:51135645-51821787 |
Enhancers Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv535704 |
chr2:51135645-51821787 |
Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1001552 |
chr2:51225970-52139741 |
Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv535708 |
chr2:51225970-52139741 |
Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv821624 |
chr2:51513925-51844864 |
Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv1011021 |
chr2:51712589-51803683 |
Enhancers Weak transcription Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv874069 |
chr2:51723107-52006583 |
Flanking Active TSS Enhancers Active TSS Weak transcription ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv1011738 |
chr2:51731251-51976068 |
Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv581881 |
chr2:51735494-51862691 |
Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv874070 |
chr2:51753361-51810439 |
Enhancers
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 11 |
nsv457718 |
chr2:51756961-51797785 |
Enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 12 |
nsv581883 |
chr2:51756961-51797785 |
Enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 13 |
nsv457729 |
chr2:51756961-51813968 |
Enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 14 |
nsv581884 |
chr2:51756961-51813968 |
Enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 15 |
nsv457740 |
chr2:51768912-51801383 |
Enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 16 |
nsv581886 |
chr2:51768912-51801383 |
Enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 17 |
nsv874071 |
chr2:51786520-51819386 |
Enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:17 , 50 per page) page:
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