Variant report

Variant	rs181118150
Chromosome Location	chr12:9897769-9897770
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:9884042..9890048-chr12:9890384..9897967,9	K562	blood:
2	chr12:9893977..9895808-chr12:9897315..9898952,2	K562	blood:

Variant related genes	Relation type
ENSG00000184293	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758293	chr12:9371595-9923529	Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	40 gene(s)	inside rSNPs	diseases
2	esv2759878	chr12:9371595-9923529	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	40 gene(s)	inside rSNPs	diseases
3	nsv976572	chr12:9896625-9906830	Genic enhancers ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:9892800-9903200	Weak transcription	HUES6 Cell Line	embryonic stem cell
2	chr12:9893400-9910800	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr12:9895600-9906000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
4	chr12:9895800-9898000	Enhancers	Primary T helper naive cells from peripheral blood	blood
5	chr12:9895800-9903200	Weak transcription	Primary hematopoietic stem cells	blood
6	chr12:9896200-9903200	Weak transcription	Monocytes-CD14+_RO01746	blood
7	chr12:9896400-9898000	Enhancers	Primary T helper cells PMA-I stimulated	--
8	chr12:9896400-9903200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
9	chr12:9896400-9911000	Weak transcription	Duodenum Mucosa	Duodenum
10	chr12:9896600-9903000	Weak transcription	Primary B cells from cord blood	blood
11	chr12:9896800-9900800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
12	chr12:9896800-9902800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr12:9896800-9903000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
14	chr12:9896800-9903000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr12:9896800-9903200	Weak transcription	Primary B cells from peripheral blood	blood
16	chr12:9896800-9903200	Weak transcription	GM12878-XiMat	blood
17	chr12:9896800-9903400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
18	chr12:9897200-9902800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
19	chr12:9897200-9903000	Weak transcription	Primary T helper cells fromperipheralblood	blood
20	chr12:9897400-9902800	Weak transcription	Primary T cells from cord blood	blood
21	chr12:9897600-9898000	Enhancers	HUVEC	blood vessel
22	chr12:9897600-9898200	Enhancers	iPS-15b Cell Line	embryonic stem cell

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