The 2.0 version of rSNPBase

Variant report

Variant rs181118925
Chromosome Location chr1:84464233-84464234
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84460000-84465600 Active TSS Brain Anterior Caudate brain
2 chr1:84461200-84465600 Active TSS Brain Cingulate Gyrus brain
3 chr1:84461800-84465600 Active TSS Brain Inferior Temporal Lobe brain
4 chr1:84461800-84465800 Active TSS Aorta Aorta
5 chr1:84461800-84465800 Active TSS Brain Substantia Nigra brain
6 chr1:84462000-84465600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
7 chr1:84462000-84466000 Active TSS Brain Hippocampus Middle brain
8 chr1:84462000-84467000 Active TSS Brain Angular Gyrus brain
9 chr1:84463000-84465800 Active TSS NHLF lung
10 chr1:84463400-84465600 Active TSS Pancreatic Islets Pancreatic Islet
11 chr1:84463600-84464400 Active TSS Fetal Brain Male brain
12 chr1:84463600-84466400 Active TSS Stomach Smooth Muscle stomach
13 chr1:84463800-84464400 Bivalent/Poised TSS ES-WA7 Cell Line embryonic stem cell
14 chr1:84463800-84464400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:84463800-84464400 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:84463800-84465000 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:84463800-84465400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr1:84463800-84465400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
19 chr1:84463800-84465400 Active TSS NHEK skin
20 chr1:84463800-84465600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
21 chr1:84463800-84465600 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
22 chr1:84463800-84465600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:84463800-84465600 Active TSS Right Atrium heart
24 chr1:84463800-84465600 Active TSS Right Ventricle heart
25 chr1:84463800-84465800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
26 chr1:84463800-84465800 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
27 chr1:84464000-84464400 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
28 chr1:84464000-84464400 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
29 chr1:84464000-84464400 Bivalent Enhancer Primary monocytes fromperipheralblood blood
30 chr1:84464000-84464400 Bivalent Enhancer Primary B cells from peripheral blood blood
31 chr1:84464000-84464400 Bivalent/Poised TSS Primary T helper cells PMA-I stimulated --
32 chr1:84464000-84464400 Bivalent Enhancer Primary T helper 17 cells PMA-I stimulated --
33 chr1:84464000-84464400 Bivalent Enhancer Primary T killer naive cells fromperipheralblood blood
34 chr1:84464000-84464400 Flanking Active TSS Adipose Nuclei Adipose
35 chr1:84464000-84464400 Active TSS Colonic Mucosa Colon
36 chr1:84464000-84464400 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
37 chr1:84464000-84464400 Enhancers Placenta Placenta
38 chr1:84464000-84464400 Enhancers Placenta Amnion Placenta Amnion
39 chr1:84464000-84464600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr1:84464000-84464600 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
41 chr1:84464000-84464800 Bivalent/Poised TSS Stomach Mucosa stomach
42 chr1:84464000-84465200 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr1:84464000-84465200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr1:84464000-84465200 Bivalent/Poised TSS Fetal Intestine Large intestine
45 chr1:84464000-84465200 Bivalent/Poised TSS Fetal Muscle Leg muscle
46 chr1:84464000-84465200 Active TSS Gastric stomach
47 chr1:84464000-84465200 Active TSS Lung lung
48 chr1:84464000-84465200 Bivalent/Poised TSS Monocytes-CD14+_RO01746 blood
49 chr1:84464000-84465200 Active TSS NH-A brain
50 chr1:84464000-84465200 Active TSS Osteobl bone

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Last update: Aug 31, 2015