The 2.0 version of rSNPBase

Variant report

Variant rs1812053
Chromosome Location chr17:19667620-19667621
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:19657400-19673000 Weak transcription HUVEC blood vessel
2 chr17:19657400-19674000 Weak transcription Primary monocytes fromperipheralblood blood
3 chr17:19660400-19673800 Weak transcription Fetal Intestine Small intestine
4 chr17:19664200-19674000 Weak transcription Monocytes-CD14+_RO01746 blood
5 chr17:19665800-19673800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr17:19666000-19667800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr17:19666000-19669600 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr17:19666000-19669600 Weak transcription Adipose Nuclei Adipose
9 chr17:19666000-19669800 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr17:19666000-19669800 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr17:19666000-19670000 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr17:19666000-19670000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr17:19666000-19670400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr17:19666000-19671200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr17:19666000-19676400 Weak transcription Fetal Intestine Large intestine
16 chr17:19666000-19676800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr17:19666000-19676800 Weak transcription Fetal Lung lung
18 chr17:19666000-19677000 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr17:19666000-19678200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr17:19666000-19678600 Weak transcription Left Ventricle heart
21 chr17:19666000-19678800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr17:19666000-19679200 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr17:19666000-19691200 Weak transcription Spleen Spleen
24 chr17:19666000-19691800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr17:19666200-19669600 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr17:19666200-19669600 Weak transcription Brain Anterior Caudate brain
27 chr17:19666200-19669600 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr17:19666200-19669800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr17:19666200-19670000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr17:19666200-19670000 Weak transcription Brain Inferior Temporal Lobe brain
31 chr17:19666200-19670000 Weak transcription Pancreas Pancrea
32 chr17:19666200-19673400 Weak transcription Fetal Brain Female brain
33 chr17:19666200-19673600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr17:19666200-19676800 Weak transcription Gastric stomach
35 chr17:19666400-19669400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr17:19666400-19669800 Weak transcription Colon Smooth Muscle Colon
37 chr17:19666400-19670000 Weak transcription Ovary ovary
38 chr17:19666400-19672800 Weak transcription Brain Germinal Matrix brain
39 chr17:19666400-19673800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
40 chr17:19666400-19675200 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr17:19666600-19669400 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr17:19666600-19669600 Weak transcription A549 lung
43 chr17:19667200-19670200 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015