Variant report

Variant	rs181242822
Chromosome Location	chr4:8316912-8316913
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr4:8315694..8318647-chr4:8336893..8339393,2	K562	blood:
2	chr4:8306129..8312354-chr4:8314662..8318399,6	MCF-7	breast:
3	chr4:8311363..8313807-chr4:8315101..8317109,2	K562	blood:
4	chr4:8183603..8185806-chr4:8316475..8318494,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000125089	Chromatin interaction

Extended variants
information (count: 10 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1002794	chr4:8110083-8490934	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
2	nsv878595	chr4:8154534-8390646	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
3	nsv829853	chr4:8172065-8320868	Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Strong transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
4	nsv878601	chr4:8214767-8440951	Flanking Active TSS Enhancers Strong transcription Weak transcription Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
5	nsv878602	chr4:8214767-8448992	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
6	nsv1009011	chr4:8225669-8424831	Weak transcription Enhancers Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
7	nsv461218	chr4:8254784-8320126	Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	11 gene(s)	inside rSNPs	diseases
8	nsv593628	chr4:8254784-8320126	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	11 gene(s)	inside rSNPs	diseases
9	nsv470013	chr4:8315938-8377058	Enhancers ZNF genes & repeats Weak transcription Genic enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
10	nsv878604	chr4:8315938-8618916	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:8279000-8317200	Weak transcription	Gastric	stomach
2	chr4:8311600-8317200	Weak transcription	Right Atrium	heart
3	chr4:8311800-8320800	Weak transcription	Psoas Muscle	Psoas
4	chr4:8312400-8317200	Weak transcription	Right Ventricle	heart
5	chr4:8316400-8318800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr4:8316600-8317400	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
7	chr4:8316600-8317400	Enhancers	Stomach Smooth Muscle	stomach
8	chr4:8316600-8317800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
9	chr4:8316600-8318600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr4:8316600-8318600	Enhancers	Primary hematopoietic stem cells	blood
11	chr4:8316600-8319000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr4:8316600-8319000	Bivalent Enhancer	Fetal Muscle Trunk	muscle
13	chr4:8316600-8319200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr4:8316600-8321000	Enhancers	Fetal Heart	heart
15	chr4:8316800-8317200	Enhancers	Hela-S3	cervix
16	chr4:8316800-8317400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr4:8316800-8317400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr4:8316800-8317400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr4:8316800-8317400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr4:8316800-8317800	Enhancers	iPS-15b Cell Line	embryonic stem cell
21	chr4:8316800-8318000	Enhancers	HUES64 Cell Line	embryonic stem cell
22	chr4:8316800-8318200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr4:8316800-8318200	Enhancers	Fetal Intestine Large	intestine
24	chr4:8316800-8318400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
25	chr4:8316800-8318400	Enhancers	Left Ventricle	heart
26	chr4:8316800-8318600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
27	chr4:8316800-8318600	Enhancers	Primary hematopoietic stem cells short term culture	blood
28	chr4:8316800-8318800	Enhancers	Fetal Muscle Leg	muscle
29	chr4:8316800-8318800	Enhancers	Thymus	Thymus
30	chr4:8316800-8319000	Enhancers	Ovary	ovary
31	chr4:8316800-8319200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
32	chr4:8316800-8319200	Enhancers	Fetal Thymus	thymus
33	chr4:8316800-8319400	Enhancers	Placenta Amnion	Placenta Amnion

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