Variant report

Variant	rs181260314
Chromosome Location	chr5:74191743-74191744
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv518286	chr5:74169045-74243120	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv965527	chr5:74181141-74195624	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv830352	chr5:74189495-74337944	Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:74191000-74191800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr5:74191200-74193000	Enhancers	Fetal Brain Female	brain
3	chr5:74191400-74191800	Enhancers	Brain Substantia Nigra	brain
4	chr5:74191400-74192200	Enhancers	Fetal Lung	lung
5	chr5:74191400-74192400	Enhancers	Brain Cingulate Gyrus	brain
6	chr5:74191400-74192400	Enhancers	Fetal Heart	heart
7	chr5:74191600-74191800	Enhancers	Brain Anterior Caudate	brain
8	chr5:74191600-74191800	Enhancers	Brain Hippocampus Middle	brain
9	chr5:74191600-74192200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr5:74191600-74192200	Enhancers	Stomach Smooth Muscle	stomach
11	chr5:74191600-74192400	Enhancers	Liver	Liver
12	chr5:74191600-74192400	Enhancers	Brain Angular Gyrus	brain
13	chr5:74191600-74192400	Enhancers	Brain Inferior Temporal Lobe	brain
14	chr5:74191600-74192400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
15	chr5:74191600-74192400	Enhancers	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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