Variant report

Variant	rs181301865
Chromosome Location	chr10:44758142-44758143
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	EP300	chr10:44755346-44758381	SK-N-SH	brain:	n/a	chr10:44755726-44755740

Variant related genes	Relation type
ENSG00000237590	TF binding region

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1038511	chr10:44596885-44870030	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv508579	chr10:44709770-44799256	Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv3495951	chr10:44757085-44761391	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
4	esv3496062	chr10:44757120-44761379	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
5	esv3495840	chr10:44757152-44761335	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
6	esv3496173	chr10:44757152-44761335	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44754600-44758400	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr10:44755400-44758200	Enhancers	Fetal Heart	heart
3	chr10:44755800-44758400	Enhancers	Right Ventricle	heart
4	chr10:44756000-44758400	Enhancers	Spleen	Spleen
5	chr10:44756000-44759200	Enhancers	NHDF-Ad	bronchial
6	chr10:44756000-44761000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr10:44756200-44760800	Enhancers	Rectal Smooth Muscle	rectum
8	chr10:44756400-44760200	Enhancers	Colon Smooth Muscle	Colon
9	chr10:44756600-44758200	Enhancers	Ovary	ovary
10	chr10:44756600-44759200	Enhancers	Skeletal Muscle Male	skeletal muscle
11	chr10:44756600-44760200	Enhancers	Adipose Nuclei	Adipose
12	chr10:44756800-44759800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr10:44757000-44758200	Enhancers	Pancreas	Pancrea
14	chr10:44757000-44758400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr10:44757000-44758400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr10:44757200-44758400	Enhancers	Lung	lung
17	chr10:44757200-44759600	Enhancers	GM12878-XiMat	blood
18	chr10:44757200-44760600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
19	chr10:44757400-44759600	Enhancers	Stomach Smooth Muscle	stomach
20	chr10:44757400-44760400	Enhancers	Fetal Stomach	stomach
21	chr10:44757600-44759000	Enhancers	Rectal Mucosa Donor 31	rectum
22	chr10:44757800-44758200	Weak transcription	Fetal Intestine Small	intestine
23	chr10:44757800-44758800	Weak transcription	Skeletal Muscle Female	skeletal muscle
24	chr10:44757800-44759000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
25	chr10:44757800-44759000	Weak transcription	HSMMtube	muscle
26	chr10:44757800-44759200	Weak transcription	Placenta	Placenta
27	chr10:44757800-44759600	Weak transcription	Left Ventricle	heart
28	chr10:44757800-44760200	Enhancers	Osteobl	bone
29	chr10:44758000-44758400	Weak transcription	NHLF	lung
30	chr10:44758000-44758600	Weak transcription	Fetal Muscle Leg	muscle

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