Variant report

Variant	rs181425747
Chromosome Location	chr11:34196767-34196768
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:34195965..34197005-chr11:34489545..34490431,3	K562	blood:
2	chr11:34192703..34198960-chr11:34377862..34381176,7	MCF-7	breast:
3	chr11:34189648..34198426-chr11:34377718..34382191,19	MCF-7	breast:
4	chr11:34071760..34074563-chr11:34194562..34197437,2	MCF-7	breast:
5	chr11:34187334..34191068-chr11:34191112..34197188,7	K562	blood:
6	chr11:34195960..34197951-chr11:34375178..34377158,2	MCF-7	breast:
7	chr11:34195492..34196865-chr11:34379079..34381984,35	K562	blood:
8	chr11:34185403..34188000-chr11:34196564..34198750,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000135387	Chromatin interaction
ENSG00000166016	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv523431	chr11:34192092-34199849	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv517429	chr11:34196484-34199849	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:70 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:34183600-34198000	Weak transcription	Fetal Lung	lung
2	chr11:34192800-34203000	Weak transcription	Aorta	Aorta
3	chr11:34193800-34198400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr11:34195400-34196800	Enhancers	Brain Angular Gyrus	brain
5	chr11:34195400-34197000	Enhancers	Fetal Thymus	thymus
6	chr11:34195800-34196800	Enhancers	Spleen	Spleen
7	chr11:34196000-34197000	Enhancers	HSMMtube	muscle
8	chr11:34196200-34196800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr11:34196200-34196800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr11:34196200-34196800	Enhancers	Fetal Stomach	stomach
11	chr11:34196200-34197200	Enhancers	Primary T regulatory cells fromperipheralblood	blood
12	chr11:34196200-34197400	Enhancers	Breast Myoepithelial Primary Cells	Breast
13	chr11:34196200-34198000	Enhancers	Primary hematopoietic stem cells short term culture	blood
14	chr11:34196200-34198800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr11:34196200-34199000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr11:34196200-34207600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr11:34196400-34196800	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr11:34196400-34196800	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
19	chr11:34196400-34196800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
20	chr11:34196400-34196800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
21	chr11:34196400-34196800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr11:34196400-34196800	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr11:34196400-34196800	Enhancers	Brain Germinal Matrix	brain
24	chr11:34196400-34196800	Enhancers	Brain Hippocampus Middle	brain
25	chr11:34196400-34196800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
26	chr11:34196400-34196800	Enhancers	Brain Substantia Nigra	brain
27	chr11:34196400-34196800	Enhancers	Duodenum Mucosa	Duodenum
28	chr11:34196400-34196800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
29	chr11:34196400-34196800	Enhancers	Right Ventricle	heart
30	chr11:34196400-34196800	Enhancers	GM12878-XiMat	blood
31	chr11:34196400-34196800	Enhancers	Osteobl	bone
32	chr11:34196400-34197000	Enhancers	NH-A	brain
33	chr11:34196400-34197200	Enhancers	Cortex derived primary cultured neurospheres	brain
34	chr11:34196400-34197200	Enhancers	Duodenum Smooth Muscle	Duodenum
35	chr11:34196400-34197200	Weak transcription	NHEK	skin
36	chr11:34196400-34197400	Weak transcription	Primary monocytes fromperipheralblood	blood
37	chr11:34196400-34197400	Enhancers	Liver	Liver
38	chr11:34196400-34197600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
39	chr11:34196400-34197600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
40	chr11:34196400-34198800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
41	chr11:34196400-34199200	Enhancers	A549	lung
42	chr11:34196400-34203400	Weak transcription	Fetal Brain Male	brain
43	chr11:34196400-34206800	Weak transcription	Gastric	stomach
44	chr11:34196400-34207600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr11:34196600-34196800	Enhancers	iPS-15b Cell Line	embryonic stem cell
46	chr11:34196600-34196800	Enhancers	iPS-18 Cell Line	embryonic stem cell
47	chr11:34196600-34196800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
48	chr11:34196600-34196800	Enhancers	Placenta	Placenta
49	chr11:34196600-34196800	Enhancers	Stomach Smooth Muscle	stomach
50	chr11:34196600-34196800	Active TSS	Hela-S3	cervix

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