Variant report

Variant	rs181539569
Chromosome Location	chr12:119801933-119801934
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047036	chr12:119477583-119992640	Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
2	nsv899552	chr12:119733874-119814623	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv916688	chr12:119801814-120044407	Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:119801000-119802000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr12:119801000-119802800	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr12:119801000-119803800	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr12:119801000-119803800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
5	chr12:119801200-119802400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr12:119801200-119802400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr12:119801200-119807800	Weak transcription	Fetal Heart	heart
8	chr12:119801400-119802800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr12:119801600-119802000	Enhancers	H9 Cell Line	embryonic stem cell
10	chr12:119801600-119802000	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
11	chr12:119801600-119802000	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
12	chr12:119801600-119803000	Enhancers	H1 Cell Line	embryonic stem cell
13	chr12:119801800-119806200	Weak transcription	HUES48 Cell Line	embryonic stem cell
14	chr12:119801800-119806600	Weak transcription	HUES6 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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