Variant report

Variant	rs181581107
Chromosome Location	chr2:114512728-114512729
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:114512629..114516386-chr2:114645660..114650521,15	K562	blood:
2	chr2:114512297..114513973-chr2:114517803..114519961,2	MCF-7	breast:
3	chr2:114510034..114517579-chr2:114643441..114655407,23	MCF-7	breast:
4	chr2:114512680..114516386-chr2:114646106..114650521,15	K562	blood:
5	chr2:114511479..114519908-chr2:114641728..114650266,13	MCF-7	breast:
6	chr2:114511724..114513896-chr2:114718190..114720983,2	K562	blood:
7	chr2:114512708..114514375-chr2:114682269..114685341,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000270019	Chromatin interaction
ENSG00000115091	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1009509	chr2:114432965-114557306	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
2	nsv535896	chr2:114432965-114557306	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
3	nsv2883	chr2:114507889-114535199	Enhancers Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	11 gene(s)	inside rSNPs	diseases
4	esv3443848	chr2:114512467-114512812	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:114461400-114513200	Weak transcription	Small Intestine	intestine
2	chr2:114468800-114512800	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr2:114481200-114513000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr2:114487200-114513200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
5	chr2:114492200-114513000	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr2:114502200-114513000	Weak transcription	H1 Cell Line	embryonic stem cell
7	chr2:114505000-114513000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr2:114505000-114513200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr2:114506800-114512800	Weak transcription	Colonic Mucosa	Colon
10	chr2:114507000-114512800	Weak transcription	Fetal Thymus	thymus
11	chr2:114507000-114513000	Weak transcription	Gastric	stomach
12	chr2:114507000-114513000	Weak transcription	Pancreas	Pancrea
13	chr2:114507000-114513400	Weak transcription	Spleen	Spleen
14	chr2:114508800-114513000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
15	chr2:114508800-114513200	Weak transcription	Sigmoid Colon	Sigmoid Colon
16	chr2:114508800-114513400	Weak transcription	Lung	lung
17	chr2:114509000-114513000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
18	chr2:114509200-114513000	Weak transcription	Primary B cells from peripheral blood	blood
19	chr2:114509400-114512800	Weak transcription	Fetal Muscle Trunk	muscle
20	chr2:114509400-114513400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr2:114509400-114513400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr2:114510400-114513000	Weak transcription	Primary T cells fromperipheralblood	blood
23	chr2:114510600-114512800	Weak transcription	Fetal Muscle Leg	muscle
24	chr2:114510600-114513000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
25	chr2:114510600-114513000	Weak transcription	Placenta	Placenta
26	chr2:114511200-114515000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr2:114511600-114515200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
28	chr2:114511800-114512800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr2:114512000-114512800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
30	chr2:114512000-114512800	Enhancers	Primary T helper cells fromperipheralblood	blood
31	chr2:114512000-114512800	Enhancers	Colon Smooth Muscle	Colon
32	chr2:114512000-114513000	Enhancers	Primary neutrophils fromperipheralblood	blood
33	chr2:114512000-114513000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
34	chr2:114512000-114513400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
35	chr2:114512000-114513400	Flanking Active TSS	Dnd41	blood
36	chr2:114512000-114514600	Active TSS	HSMMtube	muscle
37	chr2:114512000-114514800	Active TSS	HMEC	breast
38	chr2:114512000-114515200	Active TSS	NHDF-Ad	bronchial
39	chr2:114512000-114515200	Active TSS	NHLF	lung
40	chr2:114512000-114515400	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
41	chr2:114512200-114512800	Flanking Active TSS	Duodenum Mucosa	Duodenum
42	chr2:114512200-114512800	Enhancers	Monocytes-CD14+_RO01746	blood
43	chr2:114512200-114513000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
44	chr2:114512200-114513000	Enhancers	Primary T killer memory cells from peripheral blood	blood
45	chr2:114512200-114513200	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr2:114512200-114513400	Flanking Active TSS	Brain Germinal Matrix	brain
47	chr2:114512200-114513600	Flanking Active TSS	Primary T cells from cord blood	blood
48	chr2:114512200-114513800	Flanking Active TSS	Primary B cells from cord blood	blood
49	chr2:114512200-114513800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
50	chr2:114512200-114513800	Active TSS	Right Atrium	heart

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