Variant report

Variant	rs181657479
Chromosome Location	chr12:122281985-122281986
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529868	chr12:121956483-122944265	Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	173 gene(s)	inside rSNPs	diseases
2	nsv916686	chr12:122240149-122714056	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	89 gene(s)	inside rSNPs	diseases
3	nsv899568	chr12:122254713-122456524	Active TSS Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
4	esv2433173	chr12:122281855-122283681	Weak transcription Enhancers Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:122278200-122294000	Weak transcription	Spleen	Spleen
2	chr12:122278200-122296400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr12:122278400-122283600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr12:122278400-122293000	Weak transcription	GM12878-XiMat	blood
5	chr12:122278400-122295400	Weak transcription	Fetal Intestine Small	intestine
6	chr12:122278600-122283600	Weak transcription	Monocytes-CD14+_RO01746	blood
7	chr12:122278800-122283000	Weak transcription	Primary B cells from peripheral blood	blood
8	chr12:122278800-122283400	Weak transcription	Primary monocytes fromperipheralblood	blood
9	chr12:122278800-122283600	Weak transcription	Primary neutrophils fromperipheralblood	blood
10	chr12:122278800-122283800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
11	chr12:122278800-122287200	Weak transcription	Primary B cells from cord blood	blood
12	chr12:122281200-122282000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr12:122281400-122282000	Enhancers	Primary hematopoietic stem cells short term culture	blood
14	chr12:122281400-122292600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr12:122281600-122282000	Enhancers	K562	blood
16	chr12:122281800-122284800	Weak transcription	Placenta	Placenta
17	chr12:122281800-122286400	Weak transcription	HepG2	liver
18	chr12:122281800-122288600	Strong transcription	Liver	Liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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