Variant report

Variant	rs181690342
Chromosome Location	chrX:122602837-122602838
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869296	chrX:122602829-122716872	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:122583800-122614200	Weak transcription	Brain Germinal Matrix	brain
2	chrX:122599000-122610400	Weak transcription	Brain Angular Gyrus	brain
3	chrX:122599400-122610000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chrX:122601000-122614800	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chrX:122602000-122603600	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chrX:122602000-122603800	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chrX:122602400-122603000	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chrX:122602400-122603000	Enhancers	HUES6 Cell Line	embryonic stem cell
9	chrX:122602600-122610000	Weak transcription	Pancreatic Islets	Pancreatic Islet

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links