Variant report
| Variant | rs181692800 |
|---|---|
| Chromosome Location | chr5:127334669-127334670 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:127297800-127358400 | Weak transcription | Primary hematopoietic stem cells | blood |
| 2 | chr5:127323800-127338200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 3 | chr5:127324000-127350400 | Weak transcription | HSMMtube | muscle |
| 4 | chr5:127324200-127334800 | Weak transcription | K562 | blood |
| 5 | chr5:127324200-127342800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 6 | chr5:127324400-127337400 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 7 | chr5:127324400-127337400 | Weak transcription | HMEC | breast |
| 8 | chr5:127324400-127337600 | Weak transcription | NHEK | skin |
| 9 | chr5:127324400-127354800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 10 | chr5:127324400-127358400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 11 | chr5:127326200-127334800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 12 | chr5:127326400-127359400 | Weak transcription | GM12878-XiMat | blood |
| 13 | chr5:127327800-127359400 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 14 | chr5:127328200-127379800 | Weak transcription | Esophagus | oesophagus |
| 15 | chr5:127329400-127351600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 16 | chr5:127329800-127334800 | Weak transcription | A549 | lung |
| 17 | chr5:127330200-127337400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 18 | chr5:127330400-127337400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 19 | chr5:127331800-127335600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 20 | chr5:127331800-127345000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 21 | chr5:127332000-127335400 | Enhancers | Stomach Mucosa | stomach |
| 22 | chr5:127332200-127335600 | Enhancers | Fetal Intestine Large | intestine |
| 23 | chr5:127332200-127335800 | Enhancers | Duodenum Mucosa | Duodenum |
| 24 | chr5:127332200-127335800 | Enhancers | Fetal Intestine Small | intestine |
| 25 | chr5:127332400-127337400 | Weak transcription | Primary B cells from cord blood | blood |
| 26 | chr5:127332400-127388800 | Weak transcription | Aorta | Aorta |
| 27 | chr5:127333200-127335800 | Enhancers | Small Intestine | intestine |
| 28 | chr5:127333400-127335000 | Strong transcription | Primary T cells from cord blood | blood |
| 29 | chr5:127333600-127338200 | Weak transcription | Ovary | ovary |
| 30 | chr5:127333600-127339400 | Weak transcription | Right Ventricle | heart |
| 31 | chr5:127333600-127341600 | Weak transcription | Psoas Muscle | Psoas |
| 32 | chr5:127333600-127354200 | Weak transcription | Left Ventricle | heart |
| 33 | chr5:127333600-127358200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 34 | chr5:127333600-127358400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 35 | chr5:127333600-127388800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 36 | chr5:127333600-127417800 | Weak transcription | Pancreas | Pancrea |
| 37 | chr5:127333800-127370800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 38 | chr5:127334000-127335600 | Weak transcription | Colon Smooth Muscle | Colon |
| 39 | chr5:127334400-127335000 | Enhancers | Gastric | stomach |
| 40 | chr5:127334600-127394000 | Weak transcription | Lung | lung |
