Variant report

Variant	rs181701072
Chromosome Location	chr5:74095525-74095526
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv598653	chr5:73992881-74095542	Active TSS Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv968949	chr5:74095023-74095806	Strong transcription Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:88 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:74064000-74112400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr5:74064200-74102000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr5:74064400-74134600	Weak transcription	Fetal Brain Male	brain
4	chr5:74064800-74101200	Strong transcription	iPS-20b Cell Line	embryonic stem cell
5	chr5:74066600-74112800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
6	chr5:74069000-74153000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr5:74069600-74102600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
8	chr5:74069800-74097000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
9	chr5:74070000-74097000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr5:74070000-74111600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
11	chr5:74072400-74095600	Weak transcription	Left Ventricle	heart
12	chr5:74074200-74102600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
13	chr5:74074800-74097200	Weak transcription	Rectal Mucosa Donor 29	rectum
14	chr5:74074800-74097400	Weak transcription	Liver	Liver
15	chr5:74074800-74102200	Weak transcription	Primary B cells from peripheral blood	blood
16	chr5:74074800-74143400	Weak transcription	Primary B cells from cord blood	blood
17	chr5:74081200-74101200	Strong transcription	HUES64 Cell Line	embryonic stem cell
18	chr5:74081200-74101200	Strong transcription	iPS-18 Cell Line	embryonic stem cell
19	chr5:74081400-74097800	Strong transcription	H9 Cell Line	embryonic stem cell
20	chr5:74081400-74101400	Strong transcription	HUES6 Cell Line	embryonic stem cell
21	chr5:74081600-74098000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr5:74081600-74098600	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
23	chr5:74081800-74101200	Strong transcription	HUES48 Cell Line	embryonic stem cell
24	chr5:74082400-74097800	Strong transcription	H1 Cell Line	embryonic stem cell
25	chr5:74083200-74098000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr5:74085800-74098000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr5:74086600-74097400	Weak transcription	Aorta	Aorta
28	chr5:74087000-74097000	Weak transcription	Brain Germinal Matrix	brain
29	chr5:74087200-74096400	Weak transcription	Fetal Brain Female	brain
30	chr5:74087600-74112000	Weak transcription	A549	lung
31	chr5:74087600-74130000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
32	chr5:74088800-74097000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
33	chr5:74088800-74101200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
34	chr5:74090800-74099200	Strong transcription	HepG2	liver
35	chr5:74091000-74097800	Strong transcription	Dnd41	blood
36	chr5:74091400-74098200	Strong transcription	Primary T helper cells fromperipheralblood	blood
37	chr5:74092600-74095800	Strong transcription	Primary hematopoietic stem cells	blood
38	chr5:74092800-74096400	Strong transcription	ES-I3 Cell Line	embryonic stem cell
39	chr5:74092800-74096400	Strong transcription	Primary T cells fromperipheralblood	blood
40	chr5:74093200-74096000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
41	chr5:74093400-74096000	Strong transcription	Thymus	Thymus
42	chr5:74093400-74096400	Strong transcription	NHEK	skin
43	chr5:74093800-74096400	Strong transcription	Fetal Thymus	thymus
44	chr5:74094000-74096400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
45	chr5:74094400-74096800	Weak transcription	Right Atrium	heart
46	chr5:74094600-74095600	Active TSS	Brain Substantia Nigra	brain
47	chr5:74094600-74095800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
48	chr5:74094600-74096000	Strong transcription	iPS DF 6.9 Cell Line	embryonic stem cell
49	chr5:74094600-74096000	Strong transcription	Primary T cells from cord blood	blood
50	chr5:74094600-74096000	Strong transcription	Primary T helper cells PMA-I stimulated	--

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