Variant report

Variant	rs181853151
Chromosome Location	chr8:125879176-125879177
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:125794468..125796266-chr8:125877977..125879830,2	MCF-7	breast:
2	chr8:125878085..125882426-chr8:125889275..125893034,5	MCF-7	breast:
3	chr8:125739588..125741798-chr8:125878766..125880835,2	MCF-7	breast:
4	chr8:125878699..125880326-chr8:125918486..125921255,2	MCF-7	breast:
5	chr8:125738820..125741858-chr8:125878076..125881062,3	MCF-7	breast:
6	chr8:125874768..125876836-chr8:125878794..125880786,2	MCF-7	breast:
7	chr8:125876735..125880494-chr8:125880552..125885100,4	K562	blood:
8	chr8:125877925..125881102-chr8:125882727..125885100,3	K562	blood:
9	chr8:125877381..125879616-chr8:125926000..125927902,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000170873	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891434	chr8:125630655-126324432	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
2	nsv1030803	chr8:125868684-125969635	Weak transcription Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
3	nsv1024405	chr8:125868684-125971035	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
4	nsv1020502	chr8:125868684-125972572	Active TSS Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
5	esv3398548	chr8:125878960-125879332	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:125870600-125879200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr8:125871000-125885200	Weak transcription	Esophagus	oesophagus
3	chr8:125873800-125880200	Weak transcription	Left Ventricle	heart
4	chr8:125874400-125884800	Weak transcription	Right Atrium	heart
5	chr8:125874800-125879200	Weak transcription	Right Ventricle	heart
6	chr8:125877000-125879800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr8:125877000-125879800	Enhancers	NHDF-Ad	bronchial
8	chr8:125878000-125879400	Enhancers	HSMMtube	muscle
9	chr8:125878000-125879600	Enhancers	HSMM	muscle
10	chr8:125878000-125879600	Enhancers	NH-A	brain
11	chr8:125878000-125879800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr8:125878000-125879800	Enhancers	HMEC	breast
13	chr8:125878000-125879800	Enhancers	NHEK	skin
14	chr8:125878000-125880000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr8:125878000-125880600	Enhancers	NHLF	lung
16	chr8:125878000-125881000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr8:125878000-125881000	Enhancers	Monocytes-CD14+_RO01746	blood
18	chr8:125878200-125879400	Enhancers	Primary neutrophils fromperipheralblood	blood
19	chr8:125878200-125879600	Enhancers	Osteobl	bone
20	chr8:125878200-125879800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr8:125878200-125879800	Enhancers	K562	blood
22	chr8:125878200-125880400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr8:125878200-125880800	Enhancers	Primary monocytes fromperipheralblood	blood
24	chr8:125878200-125880800	Enhancers	HUVEC	blood vessel
25	chr8:125878400-125879200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
26	chr8:125878400-125879200	Weak transcription	Psoas Muscle	Psoas
27	chr8:125878400-125879200	Enhancers	Hela-S3	cervix
28	chr8:125878400-125879600	Enhancers	Placenta Amnion	Placenta Amnion
29	chr8:125878400-125879800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr8:125878400-125880000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr8:125878600-125879400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
32	chr8:125878800-125879400	Enhancers	Skeletal Muscle Female	skeletal muscle
33	chr8:125878800-125880600	Enhancers	Placenta	Placenta
34	chr8:125879000-125879200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
35	chr8:125879000-125879200	Enhancers	Primary hematopoietic stem cells	blood
36	chr8:125879000-125879400	Flanking Active TSS	Muscle Satellite Cultured Cells	--
37	chr8:125879000-125879800	Enhancers	Fetal Heart	heart

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