Variant report

Variant	rs181935756
Chromosome Location	chr4:26957580-26957581
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv470021	chr4:26721578-27067027	Active TSS Strong transcription Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv461312	chr4:26844674-27078376	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
3	nsv593872	chr4:26844674-27078376	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	nsv1000568	chr4:26886920-27049554	Strong transcription Weak transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	esv3511134	chr4:26954754-26958552	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
6	esv2570509	chr4:26955297-26957980	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
7	esv3511139	chr4:26955304-26958502	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
8	esv3464949	chr4:26955590-26957735	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
9	esv1919348	chr4:26955763-26957645	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
10	esv15174	chr4:26955889-26957635	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
11	esv1805677	chr4:26956005-26959207	Weak transcription ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
12	esv1806200	chr4:26956005-26959207	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
13	nsv593880	chr4:26956005-26959207	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:57 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26911600-26965800	Weak transcription	HMEC	breast
2	chr4:26923200-26965800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr4:26923200-26977200	Weak transcription	Thymus	Thymus
4	chr4:26923400-26960600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
5	chr4:26938600-26969000	Weak transcription	Gastric	stomach
6	chr4:26938800-26965600	Weak transcription	NHLF	lung
7	chr4:26939200-26969000	Weak transcription	Pancreas	Pancrea
8	chr4:26942000-26961000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
9	chr4:26944400-26965600	Weak transcription	Brain Anterior Caudate	brain
10	chr4:26949200-26965600	Weak transcription	NH-A	brain
11	chr4:26949400-26963400	Weak transcription	Lung	lung
12	chr4:26950000-26980200	Weak transcription	Spleen	Spleen
13	chr4:26950200-26979400	Weak transcription	Ovary	ovary
14	chr4:26950400-26959600	Weak transcription	Monocytes-CD14+_RO01746	blood
15	chr4:26951800-26960200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
16	chr4:26952400-26958800	Weak transcription	Cortex derived primary cultured neurospheres	brain
17	chr4:26952400-26959200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
18	chr4:26952600-26965600	Weak transcription	Psoas Muscle	Psoas
19	chr4:26952800-26963400	Weak transcription	Fetal Muscle Leg	muscle
20	chr4:26953200-26961400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr4:26954000-26958800	Enhancers	Primary T helper cells PMA-I stimulated	--
22	chr4:26955400-26959800	Weak transcription	HSMM	muscle
23	chr4:26955400-26962600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
24	chr4:26955400-26963600	Weak transcription	HSMMtube	muscle
25	chr4:26955600-26960600	Weak transcription	Primary T cells fromperipheralblood	blood
26	chr4:26955600-26960600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
27	chr4:26955600-26960600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
28	chr4:26955600-26963000	Weak transcription	Sigmoid Colon	Sigmoid Colon
29	chr4:26955600-26965600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr4:26955600-26965600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr4:26955600-26965600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
32	chr4:26955600-26965600	Weak transcription	Muscle Satellite Cultured Cells	--
33	chr4:26955600-26965600	Weak transcription	Brain Cingulate Gyrus	brain
34	chr4:26955600-26965600	Weak transcription	Duodenum Mucosa	Duodenum
35	chr4:26955600-26966400	Weak transcription	Primary hematopoietic stem cells	blood
36	chr4:26955800-26959200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
37	chr4:26955800-26959200	Weak transcription	Primary monocytes fromperipheralblood	blood
38	chr4:26955800-26959800	Weak transcription	Primary B cells from peripheral blood	blood
39	chr4:26956000-26958000	Weak transcription	Primary T helper cells fromperipheralblood	blood
40	chr4:26956000-26960200	Weak transcription	Primary T cells from cord blood	blood
41	chr4:26956000-26966400	Weak transcription	Pancreatic Islets	Pancreatic Islet
42	chr4:26956200-26960400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
43	chr4:26956200-26960400	Weak transcription	GM12878-XiMat	blood
44	chr4:26956400-26959000	Weak transcription	Primary B cells from cord blood	blood
45	chr4:26956400-26960400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
46	chr4:26957000-26957600	Enhancers	Fetal Lung	lung
47	chr4:26957000-26957800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
48	chr4:26957200-26957600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
49	chr4:26957200-26958400	Weak transcription	Brain Angular Gyrus	brain
50	chr4:26957200-26960600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood

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