Variant report

Variant	rs182009767
Chromosome Location	chr12:124396405-124396406
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 45 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:45 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498024	chr12:123994372-124459856	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
2	esv1811815	chr12:124374716-124424636	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
3	esv1832870	chr12:124374716-124424636	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	nsv522321	chr12:124383950-124424636	Enhancers Strong transcription Genic enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
5	nsv560499	chr12:124389150-124396816	Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
6	nsv560500	chr12:124393697-124396754	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv560501	chr12:124393697-124396878	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3426888	chr12:124394824-124398372	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
9	esv3407433	chr12:124394999-124398147	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
10	esv14602	chr12:124395903-124397052	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
11	nsv560502	chr12:124395931-124396453	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
12	nsv560503	chr12:124395931-124396694	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
13	nsv560504	chr12:124395931-124396754	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
14	nsv560505	chr12:124395931-124396816	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
15	nsv560506	chr12:124395931-124396878	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
16	esv1804237	chr12:124395931-124399005	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer	Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
17	nsv560507	chr12:124395931-124400278	Enhancers Bivalent Enhancer Weak transcription Active TSS Genic enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
18	nsv560508	chr12:124395982-124396517	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
19	nsv560509	chr12:124395982-124396694	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
20	nsv560510	chr12:124395982-124396754	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
21	nsv560511	chr12:124395982-124396816	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
22	nsv560512	chr12:124395982-124396878	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
23	nsv560513	chr12:124395982-124399005	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers Active TSS	Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
24	nsv560514	chr12:124395982-124399550	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Genic enhancers	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
25	nsv560515	chr12:124395982-124400261	Enhancers Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
26	nsv560516	chr12:124396033-124396754	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
27	nsv560517	chr12:124396033-124396816	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
28	nsv560518	chr12:124396033-124396878	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
29	nsv560519	chr12:124396033-124399005	Genic enhancers Active TSS Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
30	nsv560520	chr12:124396084-124396694	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
31	nsv560521	chr12:124396084-124396754	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
32	nsv560522	chr12:124396084-124396816	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
33	nsv560523	chr12:124396084-124396878	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
34	nsv560524	chr12:124396135-124396754	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
35	nsv560525	chr12:124396135-124396816	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
36	nsv560526	chr12:124396135-124396878	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
37	nsv560527	chr12:124396135-124399550	Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
38	nsv560528	chr12:124396187-124396754	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
39	nsv560529	chr12:124396187-124396816	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
40	nsv560530	chr12:124396187-124396878	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
41	nsv560531	chr12:124396187-124400261	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Genic enhancers	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
42	nsv560532	chr12:124396239-124396816	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
43	nsv560533	chr12:124396239-124396878	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
44	nsv560534	chr12:124396239-124399550	Weak transcription Bivalent Enhancer Active TSS Enhancers Genic enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
45	nsv560535	chr12:124396294-124396878	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:124384000-124408400	Weak transcription	Fetal Brain Female	brain
2	chr12:124390200-124397600	Weak transcription	Primary neutrophils fromperipheralblood	blood
3	chr12:124393000-124397200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr12:124393200-124398800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr12:124393400-124396800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr12:124393800-124418000	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr12:124394200-124400200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr12:124394200-124418400	Weak transcription	Brain Cingulate Gyrus	brain
9	chr12:124395400-124397600	Weak transcription	Brain Germinal Matrix	brain

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