The 2.0 version of rSNPBase

Variant report

Variant rs182020038
Chromosome Location chr5:107213804-107213805
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:107194000-107219000 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr5:107195200-107214800 Weak transcription Primary B cells from peripheral blood blood
3 chr5:107195400-107214200 Weak transcription Primary B cells from cord blood blood
4 chr5:107195400-107215000 Weak transcription Primary T cells fromperipheralblood blood
5 chr5:107195400-107215000 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr5:107195400-107217800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr5:107195400-107220000 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr5:107195400-107223200 Weak transcription Left Ventricle heart
9 chr5:107195800-107214400 Weak transcription Fetal Intestine Small intestine
10 chr5:107195800-107218200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr5:107196800-107223200 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr5:107197600-107215400 Weak transcription Ovary ovary
13 chr5:107197800-107215400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr5:107197800-107215800 Weak transcription Lung lung
15 chr5:107197800-107219000 Weak transcription Gastric stomach
16 chr5:107197800-107228800 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr5:107198000-107223000 Weak transcription Adipose Nuclei Adipose
18 chr5:107202800-107215800 Weak transcription Fetal Intestine Large intestine
19 chr5:107203600-107218800 Weak transcription Stomach Smooth Muscle stomach
20 chr5:107205000-107214400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr5:107205400-107217000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr5:107205400-107217400 Weak transcription Fetal Stomach stomach
23 chr5:107205600-107214400 Weak transcription Brain Anterior Caudate brain
24 chr5:107205800-107230000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr5:107206200-107221800 Weak transcription HUVEC blood vessel
26 chr5:107209400-107226000 Weak transcription Psoas Muscle Psoas
27 chr5:107209800-107217600 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr5:107210200-107217800 Weak transcription Liver Liver
29 chr5:107211000-107219200 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr5:107211000-107220400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr5:107211600-107221400 Weak transcription Thymus Thymus
32 chr5:107211800-107219600 Weak transcription Esophagus oesophagus
33 chr5:107212000-107214200 Weak transcription Fetal Muscle Leg muscle
34 chr5:107212000-107228800 Weak transcription Aorta Aorta
35 chr5:107212200-107214800 Enhancers Fetal Brain Male brain
36 chr5:107212200-107216000 Weak transcription Primary T cells from cord blood blood
37 chr5:107212400-107214200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr5:107212400-107216400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr5:107212400-107223200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr5:107212600-107215600 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr5:107213000-107214400 Weak transcription Colon Smooth Muscle Colon
42 chr5:107213000-107223200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr5:107213200-107214200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr5:107213200-107214400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr5:107213200-107219400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr5:107213200-107225000 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr5:107213400-107214200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr5:107213400-107217600 Weak transcription Fetal Brain Female brain
49 chr5:107213600-107217600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr5:107213600-107223400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015