| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
esv3361888 |
chr1:223725597-224114846 |
Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
34 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
esv34082 |
chr1:223851018-224144509 |
Enhancers Genic enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
33 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
esv2757772 |
chr1:223935220-224363163 |
Genic enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Strong transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
36 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
esv2759000 |
chr1:223935220-224363163 |
Enhancers Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
36 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
esv1793921 |
chr1:224048131-224105965 |
Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
esv1817834 |
chr1:224052449-224095114 |
Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
esv1803377 |
chr1:224052449-224108920 |
Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv522556 |
chr1:224061898-224075483 |
ZNF genes & repeats Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
esv3453762 |
chr1:224064139-224064608 |
Enhancers ZNF genes & repeats Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
esv3453763 |
chr1:224064139-224064608 |
ZNF genes & repeats Bivalent/Poised TSS Enhancers Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
esv3435199 |
chr1:224064162-224064435 |
Weak transcription Bivalent/Poised TSS ZNF genes & repeats Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
n/a
|
| 12 |
esv3324175 |
chr1:224064194-224064437 |
ZNF genes & repeats Enhancers Weak transcription Bivalent/Poised TSS
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
n/a
|
| 13 |
esv3432937 |
chr1:224064225-224064440 |
Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
n/a
|
| 14 |
esv3377355 |
chr1:224064245-224064415 |
Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
n/a
|
Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page:
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