Variant report

Variant	rs182074825
Chromosome Location	chr7:139969431-139969432
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889247	chr7:139855216-140033631	Weak transcription Flanking Active TSS Active TSS Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	nsv1015840	chr7:139912355-139987681	Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv1026255	chr7:139944473-140043299	Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
4	esv2761371	chr7:139964350-139979655	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
5	nsv520097	chr7:139969051-139979843	Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
6	nsv519667	chr7:139969051-139992387	Active TSS Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:139960200-139971000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr7:139960400-139975200	Weak transcription	Right Atrium	heart
3	chr7:139965400-139973400	Weak transcription	HepG2	liver
4	chr7:139966600-139969600	Enhancers	Primary T helper naive cells from peripheral blood	blood
5	chr7:139966600-139969600	Enhancers	Primary T killer memory cells from peripheral blood	blood
6	chr7:139966600-139969800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
7	chr7:139966600-139969800	Enhancers	Primary T helper cells fromperipheralblood	blood
8	chr7:139966600-139970000	Enhancers	Primary T cells fromperipheralblood	blood
9	chr7:139966600-139970200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
10	chr7:139966800-139969600	Enhancers	Primary T helper cells PMA-I stimulated	--
11	chr7:139968800-139969600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr7:139969000-139969600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
13	chr7:139969000-139969800	Enhancers	Fetal Thymus	thymus
14	chr7:139969200-139969800	Enhancers	Primary T cells from cord blood	blood
15	chr7:139969400-139974800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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