Variant report

Variant	rs182117231
Chromosome Location	chr6:37053416-37053417
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:37043566..37047908-chr6:37051801..37055072,4	MCF-7	breast:
2	chr6:37027478..37029052-chr6:37051959..37053874,2	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030015	chr6:36818510-37104446	Active TSS Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
2	nsv969392	chr6:37052594-37060796	Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:37045800-37060800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr6:37050800-37054000	Enhancers	Spleen	Spleen
3	chr6:37051400-37054600	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr6:37051400-37060400	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr6:37051600-37053800	Weak transcription	Lung	lung
6	chr6:37051600-37054000	Enhancers	HepG2	liver
7	chr6:37051600-37060600	Weak transcription	A549	lung
8	chr6:37051600-37063400	Weak transcription	Small Intestine	intestine
9	chr6:37051800-37054000	Enhancers	K562	blood
10	chr6:37051800-37054400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr6:37051800-37056400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr6:37051800-37056600	Weak transcription	Fetal Stomach	stomach
13	chr6:37051800-37056600	Weak transcription	NHDF-Ad	bronchial
14	chr6:37051800-37056800	Weak transcription	Stomach Mucosa	stomach
15	chr6:37051800-37059000	Weak transcription	Hela-S3	cervix
16	chr6:37051800-37060600	Weak transcription	Pancreas	Pancrea
17	chr6:37052200-37053600	Weak transcription	Duodenum Mucosa	Duodenum
18	chr6:37052200-37060600	Weak transcription	Adipose Nuclei	Adipose
19	chr6:37052200-37070000	Weak transcription	Right Atrium	heart
20	chr6:37052400-37056600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr6:37052600-37054600	Enhancers	Primary neutrophils fromperipheralblood	blood
22	chr6:37052600-37056200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
23	chr6:37052800-37054400	Enhancers	Monocytes-CD14+_RO01746	blood
24	chr6:37052800-37056400	Weak transcription	Fetal Intestine Large	intestine
25	chr6:37052800-37069800	Weak transcription	Ovary	ovary
26	chr6:37053200-37060400	Weak transcription	Fetal Intestine Small	intestine
27	chr6:37053400-37054200	Enhancers	Placenta	Placenta

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