| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1003106 |
chr3:110264476-111105943 |
Weak transcription Enhancers Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1014199 |
chr3:110293896-110754155 |
Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv829674 |
chr3:110616256-110771049 |
Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv460821 |
chr3:110637471-111501097 |
Enhancers Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Weak transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv591275 |
chr3:110637471-111501097 |
Strong transcription Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
esv1850918 |
chr3:110685181-110889974 |
Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
5 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
esv10798 |
chr3:110694073-110699196 |
Weak transcription Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 8 |
esv3462339 |
chr3:110694115-110699190 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 9 |
esv3462340 |
chr3:110694159-110699170 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 10 |
esv3462342 |
chr3:110694180-110699151 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 11 |
esv3462343 |
chr3:110694187-110699116 |
Weak transcription Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 12 |
esv3462344 |
chr3:110694256-110699082 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page:
1
