The 2.0 version of rSNPBase

Variant report

Variant rs182261855
Chromosome Location chr13:97887240-97887241
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:97876600-97893800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr13:97878200-97896600 Weak transcription HSMMtube muscle
3 chr13:97879800-97887800 Enhancers Right Atrium heart
4 chr13:97879800-97893200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr13:97880400-97888800 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr13:97880400-97899400 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr13:97880600-97890600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr13:97880600-97890600 Weak transcription GM12878-XiMat blood
9 chr13:97881200-97889800 Weak transcription Primary hematopoietic stem cells blood
10 chr13:97881800-97888000 Weak transcription NHEK skin
11 chr13:97881800-97890000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr13:97881800-97891400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr13:97882000-97890200 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr13:97882000-97893200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr13:97882200-97891800 Weak transcription HMEC breast
16 chr13:97882800-97892000 Strong transcription Primary B cells from cord blood blood
17 chr13:97883000-97888200 Strong transcription Primary B cells from peripheral blood blood
18 chr13:97883200-97890800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr13:97883400-97888600 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr13:97883600-97887800 Strong transcription Primary T cells from cord blood blood
21 chr13:97883600-97891800 Genic enhancers Liver Liver
22 chr13:97883800-97887800 Enhancers Brain Substantia Nigra brain
23 chr13:97884000-97888000 Weak transcription Gastric stomach
24 chr13:97884000-97888200 Weak transcription Spleen Spleen
25 chr13:97884000-97889400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr13:97884000-97890400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr13:97884200-97888000 Enhancers Lung lung
28 chr13:97884200-97891200 Weak transcription Muscle Satellite Cultured Cells --
29 chr13:97884200-97893800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr13:97884400-97893000 Enhancers Skeletal Muscle Male skeletal muscle
31 chr13:97884600-97888600 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr13:97884600-97895600 Weak transcription HSMM muscle
33 chr13:97884600-97896000 Enhancers Psoas Muscle Psoas
34 chr13:97884800-97887600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr13:97884800-97887800 Weak transcription NHLF lung
36 chr13:97884800-97889000 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr13:97885000-97891400 Weak transcription Placenta Amnion Placenta Amnion
38 chr13:97885200-97887800 Enhancers Brain Inferior Temporal Lobe brain
39 chr13:97885200-97890000 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr13:97885200-97891200 Weak transcription NH-A brain
41 chr13:97885200-97893400 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr13:97885400-97887800 Enhancers Brain Anterior Caudate brain
43 chr13:97885400-97887800 Weak transcription Fetal Brain Male brain
44 chr13:97885600-97887600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr13:97885600-97887800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
46 chr13:97885600-97887800 Enhancers Duodenum Smooth Muscle Duodenum
47 chr13:97885800-97888600 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
48 chr13:97885800-97891200 Enhancers Pancreas Pancrea
49 chr13:97885800-97893600 Weak transcription Thymus Thymus
50 chr13:97886000-97887400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015