Variant report

Variant	rs182411250
Chromosome Location	chr8:125007676-125007677
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1033617	chr8:124895516-125012783	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv1035035	chr8:124895516-125020472	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv435876	chr8:125007249-125013894	Weak transcription ZNF genes & repeats Enhancers Strong transcription Active TSS Flanking Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:124971800-125052000	Weak transcription	Gastric	stomach
2	chr8:124990400-125037400	Weak transcription	Fetal Stomach	stomach
3	chr8:125005800-125008000	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr8:125006000-125007800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr8:125006200-125007800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr8:125006400-125008000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr8:125007400-125017200	Weak transcription	Stomach Mucosa	stomach
8	chr8:125007600-125015600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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