Variant report

Variant	rs182477731
Chromosome Location	chr7:39124105-39124106
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024142	chr7:38978728-39300444	Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv887968	chr7:39123165-39198960	Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:39115600-39125200	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr7:39122600-39125000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr7:39122800-39125000	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr7:39123000-39124400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr7:39123200-39124400	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
6	chr7:39123200-39124800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr7:39123200-39125000	Enhancers	Fetal Brain Male	brain
8	chr7:39123400-39124400	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr7:39123600-39124400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr7:39123600-39125000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr7:39123800-39126600	Active TSS	Pancreatic Islets	Pancreatic Islet
12	chr7:39124000-39124200	Bivalent Enhancer	Fetal Kidney	kidney
13	chr7:39124000-39124800	Enhancers	iPS-18 Cell Line	embryonic stem cell
14	chr7:39124000-39125000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links